Gene Information

Name : Clo1100_2803 (Clo1100_2803)
Accession : YP_005148766.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3219336 - 3220037 bp
Length : 702 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCGCTTATAAAGTTTGAAAATATTAAGAAAGAATATGCAGTAGGTGATGTAAAGATTACGGCGGTTGACGGTTGTAC
CTTTTCAATAGAAAAAGGTGAGCTGGTTGTCATACTTGGGCCGTCAGGAGCAGGTAAAACGACAGTCTTAAATCTTCTAG
GGGGAATGGACAGTCCCAGCGGCGGTAAAATTATAGTCGATGGTAATGAAATACACAAATACAATAAAAAAAAGCTTGTA
AGTTACAGGCGTAGAGATATAGGATTTGTATTTCAGTTTTATAATCTTGTAGGGAATCTGACTGCACTTGAAAATGTTGA
ACTTGCCTGTCAGATATGCCCTGCTTCACTTGACCCTAAAAATGTCTTGGAACAGGTGGGGTTGTCTGAACGTATGTCCA
GTTTTCCAACTCAGCTATCCGGGGGAGAGCAGCAGAGAGTAGCTATAGCAAGAGCAATAGCAAAAAATCCAAAGCTGCTT
TTGTGTGATGAACCAACAGGTGCATTGGATAGTGTAACAGGTCAGCGGATTATTGAGCTTCTTCAAAAAACTTGTAAGGA
AATGGGTATGACCACAGTTTTAATTACTCACAATGCAGTTATTGCAGATATTGCAGATAAGATAATAAAAATAAAAAACG
GCACGGTGGTGGATGTTGTTAGAAACAAAAATCCTAAAAAAGCCGCAGAGATTGTGTGGTGA

Protein sequence : 
MALIKFENIKKEYAVGDVKITAVDGCTFSIEKGELVVILGPSGAGKTTVLNLLGGMDSPSGGKIIVDGNEIHKYNKKKLV
SYRRRDIGFVFQFYNLVGNLTALENVELACQICPASLDPKNVLEQVGLSERMSSFPTQLSGGEQQRVAIARAIAKNPKLL
LCDEPTGALDSVTGQRIIELLQKTCKEMGMTTVLITHNAVIADIADKIIKIKNGTVVDVVRNKNPKKAAEIVW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_2803 YP_005148766.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 2e-56 58
Clo1100_2803 YP_005148766.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 6e-38 43
Clo1100_2803 YP_005148766.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-33 42
Clo1100_2803 YP_005148766.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-29 41