|
Name : Clo1100_2708 (Clo1100_2708) Accession : YP_005148673.1 Strain : Clostridium sp. BNL1100 Genome accession: NC_016791 Putative virulence/resistance : Virulence Product : bacteriocin ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 3087773 - 3089974 bp Length : 2202 bp Strand : - Note : PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family DNA sequence : ATGAATACCCCATTTAAACGCTATTATTGTGTCAAGCAGCATGATATCACTGATTGCGGTGCAGCATGTCTTGCAACTAT AAGTAAGCAATATGGATTTAAAACATCAATAACAAAGATAAGAGAAACGGCTGGCACCGACAAACAAGGTACAAATGCAT ATGGATTGATAAAGGCAGCTGAAAGTCTGGGTTTCACAGCAAAAGGAGTGAAGGGCAATCAGGAGGCCTTTTTTTCTGAG TTTCCGCTACCGTGCATAGCCCATGTTGTAGTTGACGGAACGTTATTGCACTATGTTGTAATACATAAAATAACTAAAAA AAAGGTTTTGGTTGCTGACCCGGGAAGGGGTATGTTAGAGTACACACCGGAGGATTTTTTTAAAATATGGACAGGTGTAC TTGTTCTGATGGTTCCCAATGTTTCCTTTAGCAAAGGGAATGAAACAAAAGGTCTGTTTTCACGATTTTTCAATCTGCTT CTCCCACAAAAGAAGCTCTTAATAAATATTTTTTTAACATCTTTAGTATATACGGTGTTAGGAATTCTAGGTTCATTTTA TTTTAAATTTTTAATTGATGATATTCTGCAATACAACCTTGAAAAAACCCTTCATGTAATTTCCATAGGCATAATTCTGC TTTACCTTTTTCAGACCTTGTTGGGAGCTTTCAGGTCTCATATGATACTGTATCTGTCACAGAAAATAGATATCCCTCTC ATATTGGGCTACTATCAGCATGTTCTTGGACTTCCTATGAATTTCTTCGGTACAAGGAAGGTCGGAGAAATTGTTTCAAG ATTTATGGATGCATCAAAGGTAAGGGATGCAATTTCAGGTGCTACTCTTACAATTATGATTGACACGCTGATGGCGCTGG CAGGAGCAATCATACTATATACACAGAATTCTACACTTTTTTTAATAGCAGCCATTATAGGGGTAATATATGGAGTTATT GTTTTTGCATTTAACAAACCAATAAAGAAAATAAATCAGGAGCAGATGGAGGAGAATGCGCAACTTACCTCTTATCTTGT TGAATCGTTGAATGGTATCGAAACTGTAAAGTCCTTTAATGCTGAGGGCGAAGCAGCACTAAAAACCGAAACAAGGTTTG TAAAGCTGCTCCGCTCTATATTCAAAGGCGGTATAATTAATAATGTACGTTCATCAATTACATCCTTTGCTGCACTGGCT GGAGGCATAGTTATCTTGTGGGCGGGTGCATGGAATGTAATTAAGGGCAGCATGTCCGTAGGGCAGCTTTTAACTTTTAA TGCGCTGCTGGGATATTTTCTTGATCCCATAAAAAACCTCATCAATCTACAGCCAATGTTGCAAACCGCAATAGTAGCAT CAGACCGACTCGGAGAAATTTTTGACCTTGAATTGGAAAAGTGCCAAAATGAAGGCGAAAAAATAAAACCTGTTGATCTA AAGGGAGATATTTCCTTTAAAAATGTTGATTTCAGGTATGGAACACGTTCTCTGGTATTAAAAAATATTGATTTTAAAAT AAAGCAGGGTGAAAAAATTGCTTTGGTAGGGGAAAGCGGATCAGGTAAAACTACGCTGGTCAAGCTTTTATTAAATCTAT ATACATGGGAAAAAGGTGAGATCACGATAAAAGACTATAATATAAAGGATATATCCTTTGAGTCTCTCAGAGAAAAGCTT GCCTACATTTCTCAGGATATTTTTATGTTCAGCGGAACAATCCGGGAAAATCTTACCTTGGGTAGCCAAAATACTGATAT GGAGCAAATAATTGATGCATGCAGAATGGCACAGGCACATGATTTTATAAACAAGCTTCCATTGCGGTATGAAACTTATC TTGAAGAAAATGGAACAAATTTATCGGGAGGGCAAAAGCAAAGGCTTGCAATAGCCAGAGCAATTTTAAAAAAACCTGAC ATATTTATAATGGACGAAGCCACCAGCAATCTGGATTCGATTACCGAAAGGGCCATTGAAGAAACACTGGAGACCGTGTG CAGCGGTGTAACTACCATTATAATAGCCCACAGATTAAGCACCATTAAACGCTGTGACAGGATATATGTAATGGAGGAAG GCAGTATTATTGAACAGGGTAGCCATCAGGAACTTATGGAACTTGGAGGTAAATATTTTGAATTATGGAAGGGCCAGTTG CCCGAAACAGCTACATATTCAATGACAGGAGGGGGACTTTAG Protein sequence : MNTPFKRYYCVKQHDITDCGAACLATISKQYGFKTSITKIRETAGTDKQGTNAYGLIKAAESLGFTAKGVKGNQEAFFSE FPLPCIAHVVVDGTLLHYVVIHKITKKKVLVADPGRGMLEYTPEDFFKIWTGVLVLMVPNVSFSKGNETKGLFSRFFNLL LPQKKLLINIFLTSLVYTVLGILGSFYFKFLIDDILQYNLEKTLHVISIGIILLYLFQTLLGAFRSHMILYLSQKIDIPL ILGYYQHVLGLPMNFFGTRKVGEIVSRFMDASKVRDAISGATLTIMIDTLMALAGAIILYTQNSTLFLIAAIIGVIYGVI VFAFNKPIKKINQEQMEENAQLTSYLVESLNGIETVKSFNAEGEAALKTETRFVKLLRSIFKGGIINNVRSSITSFAALA GGIVILWAGAWNVIKGSMSVGQLLTFNALLGYFLDPIKNLINLQPMLQTAIVASDRLGEIFDLELEKCQNEGEKIKPVDL KGDISFKNVDFRYGTRSLVLKNIDFKIKQGEKIALVGESGSGKTTLVKLLLNLYTWEKGEITIKDYNIKDISFESLREKL AYISQDIFMFSGTIRENLTLGSQNTDMEQIIDACRMAQAHDFINKLPLRYETYLEENGTNLSGGQKQRLAIARAILKKPD IFIMDEATSNLDSITERAIEETLETVCSGVTTIIIAHRLSTIKRCDRIYVMEEGSIIEQGSHQELMELGGKYFELWKGQL PETATYSMTGGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1082 | YP_698404.1 | bacteriocin ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 0.0 | 63 |
| CPR_0658 | YP_697985.1 | lactococcin g processing and transport ATP-binding protein | Virulence | Not named | Protein | 2e-150 | 47 |
