Gene Information

Name : Clo1100_2521 (Clo1100_2521)
Accession : YP_005148494.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2854766 - 2857117 bp
Length : 2352 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGATAAAATGTTCCATTTGTAATAAAAATATTGCAGTTGTGTTTGTAACAAAAATTATAGACGGGAAGCAAATTCAGGA
AGGCTTATGTGTAAGCTGTGCAAAGAAGCAGAATTTACAGCCCATAGATCAATTACTGTCGCAAACTGGTATGACAGAAT
ATGAGCTTGATAATATAAGCAAACAAGTAGGAGATATGCTTGAAGAGATGGACGGGTCTGAAATAATGGAAGCAATGCAG
GTAGACCCTGAAAACATTAATCAGGCAAATCCTTTTTTTAGTATATTGAATAAGGCATTTCCAAAGGCAAATGATTCAAA
TGATATTGAAGCAAATAATTCAAAAAGCCTTCAGCCCATGGGGCAGGATAAAGACGGGGATGAAAAGGATAAAAATTCTA
CTAAAACAAAAGCTCAGGATAAAAAGACTGTTAAAAAGAAAAAATATCTTGAAATGTATGGTACTAATCTTATTGACAAG
GCTAAAGAAGGAAGTATTGATAAGATTATAGGCAGAACCCGTGAAATTGAAAGAGTTATTCAGATTTTAAACAGAAGGAC
TAAAAACAATCCTGTTTTAATAGGAGAACCCGGTGTAGGTAAAACTGCTATTGCAGAAGGACTGGCATTAAGGATTGCTG
AAAAAACAGTTCCTGCAAAAATACAGAGTTCTGAGGTTTATCTTTTAGATATGACCAGTGTTGTTGCAGGAACACAGTTC
AGAGGACAGTTTGAAAGCAGGATGAAGGGGATAATCGAAGAAGCCAAATCATTCGGAAATATAATTCTTGTAATCGATGA
ACTTCATAATATAATGGGTGCCGGCGAGGCTGAAGGTGCAATGAATGCCGCAAACATTTTGAAGCCTGCATTATCCAGAG
GTGAAATTCAGGTAATTGGAGCTACAACTCTGAATGAATATAGAAAGCATATAGAAAAAGATACTGCTTTGGAGAGGAGA
TTCCAACCTATAATTGTTGATGAACCATCCATTGAAGAAAGTATAGAAATTTTAAAAGGTATCAAACACTACTATGAACA
ATATCACAGGGTTAAAATAAGTGACGAGATAGTAAAGGCTGCAGTAAATTATTCTGAAAGGTATATAACCGACAGACTTT
TGCCTGACAAAGCCATAGATGTAATAGATGAAGCAGGCTCAAGAGCTAACCTGAATAATACAAAATTGGCTGAGCTTGAG
TCATACAAGGAAGAACTGAAAAGGGTTCAAGAAGAGAAAGAATTTGCGGTTTCAGCGGATTCAATAGAAGACTACCAGAA
GGCAGCAGATTTAAAGGTCTATGAGTGTAAGCTTAATGAGCTTATTAAAGATATAGAGGATACCAGTAAAGATGTTGAAC
TTACCATGGAAGATATAGCAGCAGTAATAGAAGCGTGGACTAAAATTCCTATTCAAAGGCTCACCGAGGGTGAAGCCGAA
AAACTAATAAGCCTGGAAACACGTATCCATCAAAGGGTAATAGGACAGGAAAAAGCTGTAGAAGGAGTAGCAAAAGCAAT
AAGAAGAAGCAGGTCTGGGTTTAAAAAGAAGAAAAAACCATCATCCTTTATTTTTGTAGGGCCAACAGGCGTTGGTAAAA
CCGAGCTTGTACGAGCACTTTCAACTGAACTGTTTGGAAGTGAGGAAGCACTGATAAGGCTTGATATGTCTGAATACATG
GAAAAGCATACAGTTTCCAAGTTAATTGGTTCACCTCCGGGATATGTTGGATATGATGATGCAGGTCAATTAACAGAAAA
AGTAAGGAGAAGACCATATTCAGTAATACTTTTGGATGAAATTGAAAAAGCTCATCCGGACGTATTCAATATGCTGCTTC
AAATTCTTGAAGACGGAAGATTGACAGATAGTCACGGTAAGACTGTAAACTTTGAGAATACTATTATTATCATGACATCA
AATGCAGGAACTAATTTTAAATCCGGTGGCATAGGTTTTTCAAACAATACCTATACTGCCCTTGAAAGCAAAGTACGAGA
TGTAATAAAAGAAACTTTCAGGCCGGAATTTCTCAATAGAATAGATGAGATAATTGTATTTACTGAACTTGGAAAAGAGG
AATTAAAGAAAATAATCGATCTGATGCTGGAAGAAGTTTACCAAGAAGCCGGTGAAAAGGATATCAGAGTAAATGTTTCC
GATAAGGTTAAAGAATTCATATTGGAAAAAGGCTATGATCCTAAGTTTGGCGCCAGACCTTTGAGAAGAACAGTACAGAA
CTATATAGAGGATCGCCTTTCAGAAGAGTTCTTAAAAGGTACAATAAAAGAAGGTTCTCTTGTAGGGGTAGACTTAGATG
AAAATAATGAAGTAACATTAAAAATTGTCTAG

Protein sequence :
MIKCSICNKNIAVVFVTKIIDGKQIQEGLCVSCAKKQNLQPIDQLLSQTGMTEYELDNISKQVGDMLEEMDGSEIMEAMQ
VDPENINQANPFFSILNKAFPKANDSNDIEANNSKSLQPMGQDKDGDEKDKNSTKTKAQDKKTVKKKKYLEMYGTNLIDK
AKEGSIDKIIGRTREIERVIQILNRRTKNNPVLIGEPGVGKTAIAEGLALRIAEKTVPAKIQSSEVYLLDMTSVVAGTQF
RGQFESRMKGIIEEAKSFGNIILVIDELHNIMGAGEAEGAMNAANILKPALSRGEIQVIGATTLNEYRKHIEKDTALERR
FQPIIVDEPSIEESIEILKGIKHYYEQYHRVKISDEIVKAAVNYSERYITDRLLPDKAIDVIDEAGSRANLNNTKLAELE
SYKEELKRVQEEKEFAVSADSIEDYQKAADLKVYECKLNELIKDIEDTSKDVELTMEDIAAVIEAWTKIPIQRLTEGEAE
KLISLETRIHQRVIGQEKAVEGVAKAIRRSRSGFKKKKKPSSFIFVGPTGVGKTELVRALSTELFGSEEALIRLDMSEYM
EKHTVSKLIGSPPGYVGYDDAGQLTEKVRRRPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSHGKTVNFENTIIIMTS
NAGTNFKSGGIGFSNNTYTALESKVRDVIKETFRPEFLNRIDEIIVFTELGKEELKKIIDLMLEEVYQEAGEKDIRVNVS
DKVKEFILEKGYDPKFGARPLRRTVQNYIEDRLSEEFLKGTIKEGSLVGVDLDENNEVTLKIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-155 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_2521 YP_005148494.1 chaperone ATPase VFG0080 Protein 5e-153 56
Clo1100_2521 YP_005148494.1 chaperone ATPase VFG0079 Protein 1e-160 53