Gene Information

Name : Clo1100_2394 (Clo1100_2394)
Accession : YP_005148371.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2729003 - 2729272 bp
Length : 270 bp
Strand : -
Note : PFAM: Bacterial export proteins, family 3; TIGRFAM: type III secretion protein, HrpO family; flagellar biosynthetic protein FliQ

DNA sequence : 
ATGGACGAGAGCAGCATTATAAACATCGCACAAGAAGCTTTAAAAGTAATATTGTATGTATCCGCACCTATTCTGTTAAT
CAGTATGGTTGTCGGTTTGGTAATAAGTATTTTTCAGGCAACTACACAGATTCAGGAGCAGACTTTGACCTTTGTTCCGA
AAATTTTATCGGTTGTGGCTGCCATAGCACTTTTCGGCTCATGGATGTTGAGAGTATTGATAGAATATACACAGAATATA
TTTATAAACATTAATCAGTTTATAAAATAA

Protein sequence : 
MDESSIINIAQEALKVILYVSAPILLISMVVGLVISIFQATTQIQEQTLTFVPKILSVVAAIALFGSWMLRVLIEYTQNI
FININQFIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-07 43
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-07 43
ysaS AAS66847.1 YsaS Not tested SSR-1 Protein 2e-05 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_2394 YP_005148371.1 flagellar biosynthetic protein FliQ VFG2339 Protein 5e-10 45
Clo1100_2394 YP_005148371.1 flagellar biosynthetic protein FliQ VFG0395 Protein 5e-08 42