Gene Information

Name : Clo1100_0238 (Clo1100_0238)
Accession : YP_005146332.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 256252 - 256455 bp
Length : 204 bp
Strand : +
Note : PFAM: Helix-turn-helix

DNA sequence :
TTGAAAAACAAAATAAAGGATTTAAGGGAGCAATGTGGTTTTACTCAGCAATATCTTGCAGACAAAGTAAATGTGTCAAG
GCAAACAATTATATCTTTGGAAAATGGAAAATATAATCCATCCATTTTTCTAGCATATAAAATTGCAAAAGTTTTTAAAT
TGACAATTGAAGATATCTTTGTATTTGAGGAGGAGTTATTATGA

Protein sequence :
MKNKIKDLREQCGFTQQYLADKVNVSRQTIISLENGKYNPSIFLAYKIAKVFKLTIEDIFVFEEELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-04 47
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-04 47
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-09 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_0238 YP_005146332.1 putative transcriptional regulator VFG2175 Protein 1e-04 47
Clo1100_0238 YP_005146332.1 putative transcriptional regulator VFG2168 Protein 1e-04 47