Gene Information

Name : Clo1100_2346 (Clo1100_2346)
Accession : YP_005148325.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2680990 - 2682300 bp
Length : 1311 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAATTATAAAACACAGATGGAAGCGGCAAAAAAAGGTATTATTACAAATGAAATGATGATTGTTGCACAGAAGGAGTC
AATTGACGAAAACAACCTGCGGGAGCTTGTAGGTGAGGGGAAAATAGCCATTCCGGCAAATATAAACCACAGGTCCCTAA
GTCCTGAGGGAATAGGCCAAGGACTTAGAACAAAAATCAATGTAAACCTGGGTATATCAGGAGACTGTCCTGATTATACA
AAAGAAATGGAAAAGGTTGATATGTCAATCAAATTTGGCGTTGAAGCCATAATGGACCTTAGTAATTACGGAAAGACAAA
CACCTTCCGTAAAGAGCTTATTAAGCGTTCTCCTGCCATGATAGGAACAGTTCCCATGTATGATGCCATAGGCTACCTTG
AAAAGGACTTGATGGATATTAAGGCTTCAGACTTTTTTAAAGTTGTTGAGGCTCACGCTGCAGAAGGCGTGGACTTTATG
ACAATTCATGCAGGAATAAATAAACGTGCTGTTGAGTGCTTCAAACGCTCAAAAAGACTTACCAATATTGTTTCAAGAGG
AGGTTCCCTTCTTTTTGCATGGATGGAGATGACCGGCAATGAAAATCCTTTTTATGAATATTATGATGATTTCCTTGAAA
TTCTCAGGGAATATGATGTAACAATAAGTCTCGGAGATGCACTGAGGCCCGGCAGTATCAACGACAGTTCAGATGCCGGA
CAATTAAGTGAACTTATAGAGCTGGGCAACCTGACCAAACGTGCATGGGAAAAGGATGTACAGGTAATGGTTGAAGGGCC
GGGACATATGGCTATGAATGAAATAGCCGCCAATATGACTATTCAGAAAAGACTTTGTCATGGAGCACCTTTCTATGTAC
TGGGGCCTCTCGTAACTGACATAGCACCGGGCTATGACCATATTACTTCGGCAATTGGCGGAGCAATTGCTGCTGCTAAT
GGTGCAGATTTCTTGTGTTATGTAACTCCAGCAGAGCATTTAAGATTGCCAGACCTTTCGGATGTAAAAGAAGGAATTGT
TGCTTCAAAAATCGCTGCCCATGCCGCCGATATTGCTAAGGGAATACCCAATGCACGTGAAATTGATAACAAAATGAGCG
ATGCCAGACGCAGAATTGACTGGGAAGAAATGTTCTCGTATGCTATTGACGAAGATAAGGCAAGAGCATATTTTGAAAGT
ACACCTCCCACTGACAAACATACCTGTTCAATGTGCGGAAAAATGTGTGCTATGAGGACTACAAATAAGATCTTAGCCGG
TGAAAAGGTCGAGTTTGTAACAGAGAAATAG

Protein sequence :
MNYKTQMEAAKKGIITNEMMIVAQKESIDENNLRELVGEGKIAIPANINHRSLSPEGIGQGLRTKINVNLGISGDCPDYT
KEMEKVDMSIKFGVEAIMDLSNYGKTNTFRKELIKRSPAMIGTVPMYDAIGYLEKDLMDIKASDFFKVVEAHAAEGVDFM
TIHAGINKRAVECFKRSKRLTNIVSRGGSLLFAWMEMTGNENPFYEYYDDFLEILREYDVTISLGDALRPGSINDSSDAG
QLSELIELGNLTKRAWEKDVQVMVEGPGHMAMNEIAANMTIQKRLCHGAPFYVLGPLVTDIAPGYDHITSAIGGAIAAAN
GADFLCYVTPAEHLRLPDLSDVKEGIVASKIAAHAADIAKGIPNAREIDNKMSDARRRIDWEEMFSYAIDEDKARAYFES
TPPTDKHTCSMCGKMCAMRTTNKILAGEKVEFVTEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 8e-70 46
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 8e-70 46