Gene Information

Name : Clo1100_0233 (Clo1100_0233)
Accession : YP_005146327.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 251072 - 251275 bp
Length : 204 bp
Strand : +
Note : PFAM: Helix-turn-helix; manually curated

DNA sequence :
ATGATAATCAAAACAAAAATTAAAGAATACAGAGCAAAAACAAATATGAAACAGGAAGAACTGGCGGCTTTAGTTGGTGT
AAGAAGAGAAACAATAGGTCATCTTGAGAATGGTAAATATAATCCGTCTTTAAAATTGGCATTCGATATAGCGAAAGTGT
TTAATACTACAGTTGATGATATGTTTCAAATAATTGATGATTAA

Protein sequence :
MIIKTKIKEYRAKTNMKQEELAALVGVRRETIGHLENGKYNPSLKLAFDIAKVFNTTVDDMFQIIDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-07 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-07 50
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-11 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_0233 YP_005146327.1 putative transcriptional regulator VFG2168 Protein 5e-08 50
Clo1100_0233 YP_005146327.1 putative transcriptional regulator VFG2175 Protein 5e-08 50