Gene Information

Name : Clo1100_1915 (Clo1100_1915)
Accession : YP_005147922.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Unknown
Product : multidrug ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2211477 - 2212199 bp
Length : 723 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGGCTATAAATGTTAAGCTAGAGCAAGTCAGTAAAAGTTATGGCAAAAAAACAGTGTTGAATGACGTAGACTTGACCAT
AAAAGAAGGACAGATATATGGTTTAATTGGTCCATCTGGAGCTGGGAAAACCACGTTGGTCAAAACTATTGTGGGGATGG
AAAAGGTTGATGTTGGTACCGTTAAAGTATTGGATACCAAAATGCCTAACTTAAAAGTACTACAAAACATAGGCTATATG
GCTCAGTCAGATGCTTTATATCCAGAGCTAACAGCACAAGAAAATCTCCAATTCTTTGCATCTATTTTCAAAATTAGCAA
AACAGAACGTAAGGAACGAATGCTTTATGTAGCAGATTTAGTTAATCTAAGAGAAGAACTAAATAAAAAGGTGTCTGCTT
ATTCTGGGGGAATGAAACGGAGGTTATCACTAGCAATAGCCTTTATTCAAAACCCCAAAGTGCTTATATTGGATGAACCT
ACAGTGGGAATAGACCCTGAATTAAGATTATCAATTTGGAATGAATTAATACGTCTTAAAAAGGAAGAAAAGAAAACTAT
CGTAGTTACAACTCATGTTATGGATGAAGCAGAAAGATGCGATTGCCTTGCTATGATTAGAGAGGGGAAAATCCTAACAA
GCGGTTCTCCTAAAGAATTAAAGGATAATTATAATGTAACTAGTTTAGAAGAGGTGTTCTTAAAGGCAGGAGGTATCATA
TAG

Protein sequence :
MAINVKLEQVSKSYGKKTVLNDVDLTIKEGQIYGLIGPSGAGKTTLVKTIVGMEKVDVGTVKVLDTKMPNLKVLQNIGYM
AQSDALYPELTAQENLQFFASIFKISKTERKERMLYVADLVNLREELNKKVSAYSGGMKRRLSLAIAFIQNPKVLILDEP
TVGIDPELRLSIWNELIRLKKEEKKTIVVTTHVMDEAERCDCLAMIREGKILTSGSPKELKDNYNVTSLEEVFLKAGGII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 2e-44 56
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 5e-57 54
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 3e-57 52