Gene Information

Name : Clo1100_1803 (Clo1100_1803)
Accession : YP_005147818.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2076354 - 2076704 bp
Length : 351 bp
Strand : +
Note : PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type

DNA sequence :
ATGGATATATTGAAGTCAATCGAAAATGAACAAATAAGAACTGACCTTCCTAAATTGGAAATTGGTGATTTTATCAAAGT
TCATGCTAAGATTAAGGAAGGAAACAGGGAAAGAATACAGGTATTCGAAGGTACTGTTATAGCTTTAAAAGGTTCTGGAT
TAAAGGAAACTTTTACAGTTAGAAGAGTATCCTACGGTGTAGGTGTTGAAAGAGTATTCCCTGTTAACTCACCAAGAATC
GACCATATTGATGTGGTTAGAAAAGGTGTTGTTAGAAGAGCTAAGCTGTACTATCTCCGTGATAGAGTTGGTAAGGCTGC
TAAAGTTAAGGAAAGACTTGACAGAAAATAA

Protein sequence :
MDILKSIENEQIRTDLPKLEIGDFIKVHAKIKEGNRERIQVFEGTVIALKGSGLKETFTVRRVSYGVGVERVFPVNSPRI
DHIDVVRKGVVRRAKLYYLRDRVGKAAKVKERLDRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 8e-27 56
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-26 54