Gene Information

Name : Clo1100_1592 (Clo1100_1592)
Accession : YP_005147617.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1848982 - 1849659 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAGTATATTGAAAACAGAGGGATTAAGAAAATACTATGGCAAGGATGAAAACCTTGTAAAGGCTCTTGACGGTATAAA
TATGGAAATACTGGAAGGAGAGTTTGTAGCGATTGTCGGTACATCCGGAAGTGGAAAATCAACGCTTTTACATATGCTCG
GTGGGCTTGACAAGGCTACGGAGGGTAAAGTAACGGTGGCAGGTAAGGAAATTTTTGATTTGAATGATGAGCAGAAAACT
GTTTTTCGCAGAAGGAATATTGGTTTTATATTTCAGAATTACAATCTGGTCCCTATCCTGAATGTTTATGAAAACATCAC
TCTCCCGGTTGAACTGGATGGGGGAACCATTGATAAAGCATTTATAGAAGATATAATAAAAACCCTTGGCCTTGGCGGCA
AGCTTACAAACCTTCCAAACAATCTTTCGGGAGGTCAGCAGCAAAGGGTAGCCATAGCAAGGGCCCTGGCAACAAAACCC
GCCATAGTCCTTGCAGATGAGCCAACAGGCAACCTTGACAGCAGAACAGGGCTGGAGGTAGTAGGCTTGCTTAAAATGAC
AAGTAAAAGATTCCATCAGACAATCGTTATGATTACACATAATGAAGAGATTGCCCAGCTGGCGGATAGGGTCATCCGCA
TTGAGGACGGTAAAATAGTCGGGGGTGAAGTCAAATGA

Protein sequence : 
MSILKTEGLRKYYGKDENLVKALDGINMEILEGEFVAIVGTSGSGKSTLLHMLGGLDKATEGKVTVAGKEIFDLNDEQKT
VFRRRNIGFIFQNYNLVPILNVYENITLPVELDGGTIDKAFIEDIIKTLGLGGKLTNLPNNLSGGQQQRVAIARALATKP
AIVLADEPTGNLDSRTGLEVVGLLKMTSKRFHQTIVMITHNEEIAQLADRVIRIEDGKIVGGEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_1592 YP_005147617.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-71 72
Clo1100_1592 YP_005147617.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 4e-51 56
Clo1100_1592 YP_005147617.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-30 44
Clo1100_1592 YP_005147617.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 5e-31 43
Clo1100_1592 YP_005147617.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-26 41