Gene Information

Name : Clo1100_1095 (Clo1100_1095)
Accession : YP_005147152.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1294085 - 1294762 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATACAAATATCTAATATGTGTAAAATATATGAGATGGGAGAAAACGCCATATATGCACTCAATAATGTCTCACTGCA
CATTTATAAACACGAATTTGTTGCTATTGTAGGCCCGTCCGGGTCAGGCAAGTCTACATTGATGAATATGCTGGGCTGTC
TGGATGTGCCTACAACCGGAAATTATGTTTTAGACGGGCATGAGGTCAGCAAGCTGAACGACAGTCAGCTTGCTGAAATA
AGAAATAAGAAAATAGGCTTTATTTTTCAGGGCTTCAACCTTCTGAAAAAACTTACGGCTATTGAAAATGTGGAACTTCC
ATTAATCTATCAGGGTATAGGTCACAAGGAAAGACATAGAAGAAGCGTAGAAGCATTAGAACTGGTGGGATTGGGAGATA
GAGTTTACCATACGCCAAATGAATTGTCAGGAGGTCAGCAGCAAAGGGTTGCAATAGCACGTGCACTTGTCAGTAATCCG
CCCCTGATTCTGGCGGACGAACCTACCGGAAACCTTGATACCAAATCAGGTACCGAAATTATGAAGACCTTACATGAACT
TCATAAAAAGGGAAACACAATTGTACTGATAACCCATGATAACAATGTAGCTGCTCAGGCTCAAAGAATTATTAAAATTC
AGGATGGCATGATTATCGAGGATAAGGAGGCGGTGTAG

Protein sequence : 
MIQISNMCKIYEMGENAIYALNNVSLHIYKHEFVAIVGPSGSGKSTLMNMLGCLDVPTTGNYVLDGHEVSKLNDSQLAEI
RNKKIGFIFQGFNLLKKLTAIENVELPLIYQGIGHKERHRRSVEALELVGLGDRVYHTPNELSGGQQQRVAIARALVSNP
PLILADEPTGNLDTKSGTEIMKTLHELHKKGNTIVLITHDNNVAAQAQRIIKIQDGMIIEDKEAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-34 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_1095 YP_005147152.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 9e-57 55
Clo1100_1095 YP_005147152.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 8e-48 47
Clo1100_1095 YP_005147152.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 1e-41 46
Clo1100_1095 YP_005147152.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-45 46
Clo1100_1095 YP_005147152.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686946. Protein 2e-28 41