Gene Information

Name : frgB (CDVA01_0930)
Accession : YP_005144839.1
Strain : Corynebacterium diphtheriae VA01
Genome accession: NC_016790
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake system transmembrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 978879 - 979838 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTGCACTCGTCATACTCTCCTCCCTCCTCCTAGTCACCGCGGCATACAGCTTGGTAATTCCCGGAGCCGGACTAAG
CACTTGGCAGCTTCTCACCAGCGAAACCCCATTAGCACACACGGTTGTCATGCAGTGGCGCTTGCCTCGAGTGGTCACCG
GAATCCTAGTAGGCGCAGCACTAGCCATGGCAGGATCACTATTCCAATCCCTCACACGCAACCCACTCGGATCACCTGAC
ATCATCGGATTTTCAACCGGCGCCTACACCGGCGTAATCGCAGCCTTCCTCCTAGGATGGTCAGGCTTTGGTGCCACCAT
TGTCGGTGCGCTCATCGGTGGTCTAGCAGTTTCCATCGTGGTAATCGCACTGTCAGTCCGAACGCGTATCGACGGCCTCC
GCATCATCCTAGTAGGCCTAGGAATCTCAGCAATGCTCTCGGCCCTCAATAGATGGCTAATCACCCGCGGAGAACTCGAC
ACAGCACTGTCTGCTGCAAGTTGGGGTGCAGGCTCACTCAATGGACTCCGCTGGACCATAGCGATACCAGCCTGCTGTGT
TCTAGCAATTCTTATCACCACAACTATCCCATTGCGGCGATTCATCGATGTTCTTAGCCTAGGAGACGATCTCGCTGTAG
GCCTTGGACTTCGATTGCAGTTAACCAAGCTCCTCCTCCTAGTCGGTGGAGTATCCCTCGTGGCAGCAACCACCGCTGTC
GCAGGCCCCATCGCATTTGTGGCTTTGGCGTCTCCACACATTGCCCGTGCACTAACGTCGTCTGCACGAACCCCGCTTGT
AGAGACGTCGGTAATCGGCGCTTTGCTTATTGTCGTTGCCGACATCATCGGCCAGCGACTTTTCTACCCCACCCAGCTTC
CTGTTGGCCTCGTCACCGTCACCATCGGTGGCATGTACCTGCTGTGGCTCATAGCCCGCGGCTCGAAGGAGAACTCATGA

Protein sequence : 
MRALVILSSLLLVTAAYSLVIPGAGLSTWQLLTSETPLAHTVVMQWRLPRVVTGILVGAALAMAGSLFQSLTRNPLGSPD
IIGFSTGAYTGVIAAFLLGWSGFGATIVGALIGGLAVSIVVIALSVRTRIDGLRIILVGLGISAMLSALNRWLITRGELD
TALSAASWGAGSLNGLRWTIAIPACCVLAILITTTIPLRRFIDVLSLGDDLAVGLGLRLQLTKLLLLVGGVSLVAATTAV
AGPIAFVALASPHIARALTSSARTPLVETSVIGALLIVVADIIGQRLFYPTQLPVGLVTVTIGGMYLLWLIARGSKENS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-64 61
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 9e-64 61
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-64 61
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 4e-64 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
frgB YP_005144839.1 iron-siderophore uptake system transmembrane protein VFG0928 Protein 2e-35 47