Gene Information

Name : spaC (CDVA01_1841)
Accession : YP_005145748.1
Strain : Corynebacterium diphtheriae VA01
Genome accession: NC_016790
Putative virulence/resistance : Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1980393 - 1986011 bp
Length : 5619 bp
Strand : -
Note : Predicted outer membrane protein

DNA sequence :
GTGAGTAACCTACGTACCATCAAGAAACGAGCGTCTATCCCCGCAGCACTCGTCGCCATCCTCGCAATGGTCATGAGCGT
AGTACTCGTGCCGTTAATTGCAGCGCCATCAGCGAATGCGGAGCCACTACCCAAAAAAGAGTTTGAAACCTGTGGCGGTT
CTGTTGCACTTTCCTTTGACTTGTCCAATTCCCTGAGTGCTTCGGACGTGGCAAAATCTAAGCAAGCAGCGTTGGAGCTG
GTCAAGAGCTTGAAAGGATCTCCCTATCGCTTTGGTATTTACACGTTTGCTTCACACTCGCCTGCTGCTGGAAACAAAAA
TTTCACGCCAGTAAGTCTTGCTAATGAAGACGGATACAACAAAGTTGTTGCTGCTATCAATGACATCCAGATGCCAGCGA
TCCGAGAGAACCTACAGGGTTCTCCCAACGGTGGTACCAACTGGGAGGGCGGGCTCCAAGCAATCGCGAATGACATAGAC
AGCGGCATCAAGTATGACGCCGTTTACTTCATCACTGATGGTCAACCAACTTGGGATAACAATGGGCGAAATTGGTTGGG
AAACACCACCGAGGTTGTGGAATTAGAAAATGCTGTTACCCAAGCCAAACGTATTTCTGATAAAGGTGCAAAACTTATTC
CGGTGGGTATCGGCCAGCTTTCTGATGATAGGCTGTTTGATCTCTATAAACCGATTCTTCCTTCCGAATACTATTATCCG
CCGCGTGATCCATGGAAAATAGATCGTTCCCTGACCGGCAAACAAATGCTGGAGAAGATAACCTCACCAGGTCTAGCGCC
AATTATTTTGCCCGACTATTCCACATTGCCGGAGCAAATGGGGCAACAGATTTTTACCGGATGTTTCCAAATCGCTAAAA
ACATTATTGATGCAGACGGAAACGTGATAGAAAATCCAGCTGGCTGGAATTTCGATATTAAAGCGGCTCGCGAGCAAGGC
ATTCCTACGTCGATCGTGACCGATAAAAACGGTCAAGATACCTTTGCTATGAAGTCGATTAATAAAAAATCCTTCGAGAT
CACTATCACTGAACGACCTACCGGAGATCAAGAACAAAACTTCCGGTTTAAAAACGCACGCTGCCAGCGCTACTCCTATG
GGCAAGCACCTACTGATATTCCGATCAAAACTAGCGATACTTCAATTACTTTGACTGCAGACACCAAAAGCTTGATCTCT
TGCTTTTTTAATAACCTGCCAGTTGTACCGGTTTCTGTTTCGAAAAAAGTAAACGTAAATACGCCACAACTTTTAGAAGA
GCTCAACAATCAAACCTTTGATTTCACCTATAGCTGTGAAAAAGGAGCTAATGAAAAAGAAATCAAGGGAGAAATTAAGG
GCGTCCACAACGGAGAATCCAAAGAAATCGGAAAAGTTGCTGTTGGAACTCAGTGCGAAATCAAGGAAGTGACTCCCAAA
GTCGACGATTCTCGGATGAAGCTTTCCACCACTTGGAGAAGCGAAAATACCGCTGCAGAGTCTAATCAGGATAACGGTAC
ATATCGCTTTAAAGCTGGCATCGATGCGTTTAAAAACCAGAAAACAGTTCTAGCTACAGCAGAAAATAACTATGAGGCTC
AAACAGCCACTATTAAGCTGACCAAGACCATCATTAATCGTGACAAAATTCCAGCAGCAAAACTGCCCGAGAAGTTTCCT
GTCACTTACACCTGTCATTACGTACCACATCCTAATGCTCGTCCCGAACGTGGTGAGCTCACAGAAACCAACAATCCGTA
TTTTGTAGGTTCTAAAACCGTTGTCGTTCCTCGTGATGGAAGCATAGAAATCGGACCTTTTCCAGTGGGAACGCAGTGCA
GCTTTGAAGAAACTGCACGACTCGATCCGAATGTTCAAGCAGACGCTAAAATTCCTGGTTTTAGTTTGAAAACTGAGTGG
AATTCCAACATCTGTTTCGGCAACACCACTGATAATAATTCTCAAGATTGTTCTACTAACTCGGTATGGATTCCCAAACC
AGGCCAATATTCGATCAACGTAAAAAACACATACACACGTGAGCTTGCGAGCGTGGCGATCGAAAAGAAGGTGAGCGGCG
ATGCCTCTGACCTCACGAATTCACACAAGTTTTCATTCAACCTTCGATGTGAAGATTCCGGAGAAGAAGTCTATTCCCAA
GACAATATTGTGGTGAAGAAAGACGGACAGAAAGTCATCGAAGGCATTCCTGTTAATGCCGACTGTACGTTGAGCGAAAA
ACAGCCTGAGCAAAAAGGCGTGGATTTTGTGGTCCCCGAGCCGTTCCATTTCCATGCTTCAACTGCCGGCGACATTGTCA
AAGTGGTTGTAGATAACACCGCAAAACGTCAATTAGCTCCTATTTCGGTAAAGAAAATAGTTCATAAAAAAGGCTCATTT
TCTCCTGAAATTTCTGCAGCAATCGATGCATTAACCTACAACGTGGTGGCAGAATGTACGGTTCCTGGCGAAGAAACGCC
TCGAAAAGTCAAACAAACAGTAAGTGATAATCAAACTGTTCACTTCGGAAGATTTCCAGTAGGAACTACTTGTAGTTTTA
GCGAGCTCACCAATGCCCCTGCCGGAACCGAAATGAGTTATAAATTCTCGGATGGTCCAGAGGTGACAATTGAGGACTCC
ACTCCTATAAATAAGGAGCTGACGAATACGTTTGAAAACGCACATGGAGAGCTAACAGTAACCAAAAAGGTAATCCATGG
TGATATGCCTCAAGCATTAGTAGACCAGATTCCATCGAGCTTTACAGTCAACGTCACATGCTCAATCACTGGTGGTCATT
CCATCACTTTGCAAAACGATGAGGAGAAAACCGTGCCTGGGGTTGTTGCAGGTGATAGCTGCACATTAAGTGAGGAGGTA
ACCCCTATAACTGGTGCTACCCATCACAAGCACTGGTTTAACGGTGAGATGCATGAAGTTGCAGATTCTACAAACATCAC
GATTGACCCTAATGGTAGTAACGCAATTCGGTTGGAAAACCATTACGAAACCGATGATGTGCCTTTGGAACTTACCAAAC
ACGTTCGGGTCATAGACCACACTGGAAATGACGTCAACCCGGAACTAAAAAATGCCATTGTTCGACCAGACCAATCATTC
CTATTCCGATACCGTTGTGAAATCAATGGTCAAGTAGTTGCAGAAGACACATTAGGTACCCAATCCCTCAGCGCTGGTTC
CACTAAGGTGCCACGAGGATCTACTTGCACGGTAGAAGAAGATACCTCTTCGGTGGAGCTACCCAATGCATCGTTATCTC
GTGTTGAGTTCTCCGTTGACGGGACAAAGACGAATGATAAGGCATCGATAGCAATAAAATTGGATCAAAACCGACTAGAG
GCTACTAATACTTTCACGTTGAAGACTGGCTCATTTAACCTGAAAAAGAAAGTCGATGGTGAAGGCGTATCTACTATTCG
TGAGGATCGACGCTTTGAACTTGCGTATCGGTGCACCTTAGGTGACTGGAAGAAGGACGGCTCCATTACGCTGGGACGTT
TTGATAGTGCCGAATCGCATTCTGTTAAAGACATTCCCGTGGGTGCATCATGTGAGATTATTGAGGACTCTGGAAAAGCC
CAAGAGCCAAACGCACAAGTGACAGCTCGTTGGACGCATACAGACAGCACGAATGGCTGGGGCGATACCGAAGCAGCATG
CGAAAATCATGCAGCATGCCAGGTTGATCCAAATAATAAGTTTGCAACCACAGTGATGATTACTGAAAATGAGAAAGAGA
ATTTCCAAGGAACCTTTATTGTATGGAACACCTACACTTACGATAAAACAAAGGTAGAGATCAACAAGGTGTTGACGAAT
GATGGTCCAGAACTTGCTGGTAAAGATGACTTTGCCTTCATCTTGAAATGTACTGATCCTCGTTTTGCAGGAAGTGATTT
GGCAGATAAGCATTCCATTCCAGACCCCACAATTACAGTTGCATTAAATGCTAAAGGCCAAAGCCGAGCGTCGTACCAAG
TTGCGGACGAACGGCACGATAGCGTTGAGGTTCCTGTCGGGTATGACTGCACTGTGACCGAAAACCCGATTGCACTTTAC
GATGCCAAGGCGACGACCCAATTCAGTGGTCCGGCAGTGGTGGAAAATACAGCCGTGCAACGCACAGCATCAAACTCCGC
CTCGGCTCGTTTTGTCACGGAGAAGCAAGGAAATAACGGCACTCAAAAAATTCAGGTAACTAATGATTACATTCGTCCGC
GTGCCGATGTCATGGTGTATAAGACAATCGCAAAACCAGAACACTCGGTACATCCTTGGTTGCTTAACACTACATACAGC
ATCACTTATAAGTGCGACGATCGATACATCAAGGATCGTTCCTATTCAGGACACGTGGACGTCCAAGCTGATGCAGAAAA
ACCAACGCCAATTTTCGCTGGTCCTGCGGCTGACGTAAAAATTCCTGCGTCGGCAGTATGTATTTTCAGTGAAAACACCG
AAGGGCATTTACCAGATGAGGTAAAAGGCGTAGTGGATGAAACGAATAAAGTTGCTGAATTCGCTGGGGAACATGAAAAG
CGCTCCTATTTCACCCCAGAAATTAAAGATGTTGTCTTGTCGGAATCTGAACCAACACGAATTGAATTCACCAATTCGTA
CGTGATGCCTCAACGAATTTTGAGCCTACAAAAATATGTTGAGGGCGACCCCGGCCATGCTGTGATTGCTCCAGAAGAAA
CATTTGAATTCTCCTACACCTGCACCATGCCGCATCTATTCCCAAATCAACCCAATCCTATGTCGCAGGAAGTAGGAAAC
AAGGTTGCACGTGGCGTCATTAAGATTCGAGAAGGCGAGACATGGCGATCTCCTGAAGTCCCTATTGGTACGTCCTGCAC
GATCAAGGAAGAAGACGACCCCACCTTGCGCACTAACTTGGAAAACAATGCGCAGCGCATGGTGCCTACCTACTTATTCC
CCACGGAGCGCTCAGGCGCTGCTAGCGCTGCTAGTGCACCGGAGATTCCGCCGTCGACAGGCCGCCCGATTTATAACGGC
ACGGAGCCTCGCCACCAGATGCCAGAATCAGGCATTGAACTTAACGACGCCCACTCGCACACCGTGGTGATCAACAACGT
GTACACCACCGACGCTGAGATCAACATTGCCAAGGTGAATGCCGATAACTCTCCGCTGCCCGGCGCGCACTTCGCCGTCT
ATGGGATAGGGGAGAATGGCCAGCGTAATGAGTTGGCTGAGGTTGCAGATGTGCCGGCGAAGTCGGTGGAGCAGGCGTTG
TTTGCGGTGCGCTTGCGCCCTGGTAGTTACGAGTTGGTGGAGACTAAGGCTCCTCAGGGTGCGCAGTTGTTGCCTAAGCC
GTGGCGTTTTGATGTCAAGGCTGCGAATGCGGGTGCGATGGGTGATCTTGAGGTGACTTTGGATAACTATGATGCTGATT
CGGGGTTGATCACGGTGGAGCACCCGCAGGGTAAGCCGTGGTTGATCAAGGTGGCTAATGTGTCGGCATCCACACTGCCG
TTGACTGGTTCGAATGGGTATGTGCGGTGGCTGTTGGCCGGTGCTGCGGGCCTGTTGGTGGCTGCAGCATTGTGGTTAGT
GGCGCGTCGTAAGCGTTAG

Protein sequence :
MSNLRTIKKRASIPAALVAILAMVMSVVLVPLIAAPSANAEPLPKKEFETCGGSVALSFDLSNSLSASDVAKSKQAALEL
VKSLKGSPYRFGIYTFASHSPAAGNKNFTPVSLANEDGYNKVVAAINDIQMPAIRENLQGSPNGGTNWEGGLQAIANDID
SGIKYDAVYFITDGQPTWDNNGRNWLGNTTEVVELENAVTQAKRISDKGAKLIPVGIGQLSDDRLFDLYKPILPSEYYYP
PRDPWKIDRSLTGKQMLEKITSPGLAPIILPDYSTLPEQMGQQIFTGCFQIAKNIIDADGNVIENPAGWNFDIKAAREQG
IPTSIVTDKNGQDTFAMKSINKKSFEITITERPTGDQEQNFRFKNARCQRYSYGQAPTDIPIKTSDTSITLTADTKSLIS
CFFNNLPVVPVSVSKKVNVNTPQLLEELNNQTFDFTYSCEKGANEKEIKGEIKGVHNGESKEIGKVAVGTQCEIKEVTPK
VDDSRMKLSTTWRSENTAAESNQDNGTYRFKAGIDAFKNQKTVLATAENNYEAQTATIKLTKTIINRDKIPAAKLPEKFP
VTYTCHYVPHPNARPERGELTETNNPYFVGSKTVVVPRDGSIEIGPFPVGTQCSFEETARLDPNVQADAKIPGFSLKTEW
NSNICFGNTTDNNSQDCSTNSVWIPKPGQYSINVKNTYTRELASVAIEKKVSGDASDLTNSHKFSFNLRCEDSGEEVYSQ
DNIVVKKDGQKVIEGIPVNADCTLSEKQPEQKGVDFVVPEPFHFHASTAGDIVKVVVDNTAKRQLAPISVKKIVHKKGSF
SPEISAAIDALTYNVVAECTVPGEETPRKVKQTVSDNQTVHFGRFPVGTTCSFSELTNAPAGTEMSYKFSDGPEVTIEDS
TPINKELTNTFENAHGELTVTKKVIHGDMPQALVDQIPSSFTVNVTCSITGGHSITLQNDEEKTVPGVVAGDSCTLSEEV
TPITGATHHKHWFNGEMHEVADSTNITIDPNGSNAIRLENHYETDDVPLELTKHVRVIDHTGNDVNPELKNAIVRPDQSF
LFRYRCEINGQVVAEDTLGTQSLSAGSTKVPRGSTCTVEEDTSSVELPNASLSRVEFSVDGTKTNDKASIAIKLDQNRLE
ATNTFTLKTGSFNLKKKVDGEGVSTIREDRRFELAYRCTLGDWKKDGSITLGRFDSAESHSVKDIPVGASCEIIEDSGKA
QEPNAQVTARWTHTDSTNGWGDTEAACENHAACQVDPNNKFATTVMITENEKENFQGTFIVWNTYTYDKTKVEINKVLTN
DGPELAGKDDFAFILKCTDPRFAGSDLADKHSIPDPTITVALNAKGQSRASYQVADERHDSVEVPVGYDCTVTENPIALY
DAKATTQFSGPAVVENTAVQRTASNSASARFVTEKQGNNGTQKIQVTNDYIRPRADVMVYKTIAKPEHSVHPWLLNTTYS
ITYKCDDRYIKDRSYSGHVDVQADAEKPTPIFAGPAADVKIPASAVCIFSENTEGHLPDEVKGVVDETNKVAEFAGEHEK
RSYFTPEIKDVVLSESEPTRIEFTNSYVMPQRILSLQKYVEGDPGHAVIAPEETFEFSYTCTMPHLFPNQPNPMSQEVGN
KVARGVIKIREGETWRSPEVPIGTSCTIKEEDDPTLRTNLENNAQRMVPTYLFPTERSGAASAASAPEIPPSTGRPIYNG
TEPRHQMPESGIELNDAHSHTVVINNVYTTDAEINIAKVNADNSPLPGAHFAVYGIGENGQRNELAEVADVPAKSVEQAL
FAVRLRPGSYELVETKAPQGAQLLPKPWRFDVKAANAGAMGDLEVTLDNYDADSGLITVEHPQGKPWLIKVANVSASTLP
LTGSNGYVRWLLAGAAGLLVAAALWLVARRKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2010 NP_940341.1 surface-anchored membrane protein Not tested Not named Protein 0.0 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaC YP_005145748.1 putative surface-anchored fimbrial subunit VFG2199 Protein 0.0 91