Gene Information

Name : srtB (CDVA01_0139)
Accession : YP_005144048.1
Strain : Corynebacterium diphtheriae VA01
Genome accession: NC_016790
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 137847 - 138779 bp
Length : 933 bp
Strand : -
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGGCTCGCAATAACGCGAAAAGCGATACACCAACGCCAACCAACCCCAGCACCCAAGCAACAAGTAGCTCGCATAGGAA
GAAGAAAAAGAAGGGCAATCCCCTAATCGCCGTGCTCATCATCTTGGTGGGCGTGGGCGTGCTGCTCTACCCAGTGGTGG
CCACGCAATGGAATAACTTTGGCCAGCAGCGCGCAGCAGACGAATACGCCAAACTAGAAAAATCCGCGCCCCCAGAGGTA
CTCGACACCGCATGGGAAGACGCACACCGCTACAACGAGTCGCGTCCCGTCAGCGCACAAGTGATGGACGCATGGAACGA
TCACGCTGATGAGTCCTCACCGGAATACCAGCAGTACCTGCAGTACTTGTCGCAACTGGCAGAAACCGACGCCATGGGCC
AGATCATGATTCCGTCAATTAAATCCAAGCTGCCGATCTACCACGGCACCGGCCCCTCAGCCCTCGACCGCGGTGTAGGC
CACCTCTACGGCACCGACCTACCCGTCGGCGGCGAAAACCGCCACGCAGTACTCTCCGCACACACCGGCATCCAAACCGC
CACCCTGTGGGACAACCTAGTCAAAGTAAAAGAAGGCGACGCCTTCTACGTGGCAGTCTCCGGCCACAAACTCAAATACG
AAGTAGATCAGATCAAGGTGGTCACCCCAGACCACACCGATGATCTTGGCCGCGAACCCGGCAAAGACTACATCACGCTT
ATTACCTGCACCCCCTACGGCATTAACACCCACCGCCTGCTGGTTCGCGGACACCAAGTGCCCATGGACCCCTCAGAAGA
AAAGGTCTTCGAGGAGTCCACAGTGGTATGGCAATGGTGGATGTGGGCCATCGTGGCCGCAGCCGCGCTCGTGCTGATCC
TGCTCGCTTGGTGGCTACGCAAGAACAGTCGCAAAGCACAGCGCAGCAACTAG

Protein sequence :
MARNNAKSDTPTPTNPSTQATSSSHRKKKKKGNPLIAVLIILVGVGVLLYPVVATQWNNFGQQRAADEYAKLEKSAPPEV
LDTAWEDAHRYNESRPVSAQVMDAWNDHADESSPEYQQYLQYLSQLAETDAMGQIMIPSIKSKLPIYHGTGPSALDRGVG
HLYGTDLPVGGENRHAVLSAHTGIQTATLWDNLVKVKEGDAFYVAVSGHKLKYEVDQIKVVTPDHTDDLGREPGKDYITL
ITCTPYGINTHRLLVRGHQVPMDPSEEKVFEESTVVWQWWMWAIVAAAALVLILLAWWLRKNSRKAQRSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-98 98
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-58 60
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-53 58
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-42 48
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-41 47