Gene Information

Name : smpB (CDPW8_0756)
Accession : YP_005142317.1
Strain : Corynebacterium diphtheriae PW8
Genome accession: NC_016789
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 763417 - 763908 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAGAAGAAAAAGGCGAAGAATAGCAACCCAGTTATTGCTTCTAACCGAAAAGCGCGGCATGACTACAAGATTTT
GGACACCTTCGAGTGTGGAATCGTGCTGTTGGGAACCGAAATCAAGTCGATCCGTGAGGGCAAAGTATCCCTCACCGACT
CCTTTGCCACTATCGATGAAGGCGAAGCCTGGATCCGTAATCTCAATATCCCAATCTATTCCCGCGGATCGTGGACGAAC
CACTCGCCAATGCGCACCCGAAAACTTCTTCTGCACCGACGCGAAATTGATTCGCTCATGGGCAAGGTGCGTGACGGAAA
CAAAACTCTGGTTCCATTGTCTTTGTACTTCAAAGAAGGGCGACTCAAAGTGGAACTCGGACTTGCTCAGGGTAAACAAG
ACTACGACAAACGCCAAGACATCAAGCGTCGCACCGAAGAACGAGAAGTGGTTCGCGATCTGGGGCGTCGTGTCAAGGGA
ATCCACGCTTAG

Protein sequence :
MAKKKKAKNSNPVIASNRKARHDYKILDTFECGIVLLGTEIKSIREGKVSLTDSFATIDEGEAWIRNLNIPIYSRGSWTN
HSPMRTRKLLLHRREIDSLMGKVRDGNKTLVPLSLYFKEGRLKVELGLAQGKQDYDKRQDIKRRTEEREVVRDLGRRVKG
IHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-54 73
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 6e-32 54
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 8e-23 43