Gene Information

Name : srtC1 (CDPW8_0231)
Accession : YP_005141811.1
Strain : Corynebacterium diphtheriae PW8
Genome accession: NC_016789
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 222948 - 223859 bp
Length : 912 bp
Strand : +
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGGTTCTGCGAGATACCACATCCGCAGTGGGGCCAAAAGACGCATCGAAGTCGCTTCTGAGGAAGATGCTTCCTACGGT
CGTCCTGGCGCTGTGCGCCATCGTTGCGCTGCTCTACCCAGTGGTAGTTACACAACTGAATAATTGGGAACAAATGCGCG
TCGCTGACTCCTATACCAAGGAATTGGATGTGGCTGATCAAGAGGAAATCACCCAGAAACTTGTCTCAGCGCAGGCGTAC
AACGAGTTTCGCACGACGGGTCCTATTTTGGACCCTTGGTTAGCTAGAATTTCCGAAGATAACGCTGACTACCAGGCCTA
TCTTGCTGAGCTAGACACCCACGAGGTGATGGCGCGCCTCGTTGTGCCCAGCGCAAACATCGACTTGCCTGTTTACCACG
GGACGAGCGAAGAGGTTCTGCAAAAGGGAGTCGGGCATCTCTATGGCTCCGACCTACCAGTCGGAGGAGACAGCACTCAT
GCGGTGCTCACAGCCCACACTGGCCTGACCAACGCCACGCTCTTTGACCACCTTACCGACGTGGAGAAGGGAGACCCGAT
ATATATCGGAGTCTCTGGGCAGAAGATGAAGTACGAGGTTACGGACATTCGGGTTGTGCTCCCGCACGAGACGAGCAGCT
TGCGTTCTACGCCCGGCAAGGATCAGATCACGTTGATCACTTGTACTCCTTACGGGATTAACTCGCATCGCCTTCTGGTG
ACGGCTGAACGAGTTCCCCTCGATGAAGAGGCCGCCGCAGCCTTTGCCCCCAGCAAGCTTCACTGGTTCTGGTGGATGTG
GGCGATGATGGCCGCGGCACTGGTCATCGCCGTACTGCTGGTCTTGTGGATTGCGAAGACCACACGTAAATACAAAGAGG
CCCACCACCCGTCATCCTTGGCTAAGGAATAG

Protein sequence :
MVLRDTTSAVGPKDASKSLLRKMLPTVVLALCAIVALLYPVVVTQLNNWEQMRVADSYTKELDVADQEEITQKLVSAQAY
NEFRTTGPILDPWLARISEDNADYQAYLAELDTHEVMARLVVPSANIDLPVYHGTSEEVLQKGVGHLYGSDLPVGGDSTH
AVLTAHTGLTNATLFDHLTDVEKGDPIYIGVSGQKMKYEVTDIRVVLPHETSSLRSTPGKDQITLITCTPYGINSHRLLV
TAERVPLDEEAAAAFAPSKLHWFWWMWAMMAAALVIAVLLVLWIAKTTRKYKEAHHPSSLAKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-119 100
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 5e-64 56
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-59 55
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 3e-50 51
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-50 48
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-52 48
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-49 46