Gene Information

Name : irp1B (CDPW8_2099)
Accession : YP_005143647.1
Strain : Corynebacterium diphtheriae PW8
Genome accession: NC_016789
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2221135 - 2222055 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence : 
ATGTTCGGCGTTCGCAGCATTACACCGGCCGAAGCTCTATCGGCGCTCGGTGGTGCTACCGACACCGCCGGTGAAGCTGC
AGCGTGGACTCGTATTCCACGCACGCTACTGGCGCTCTGCGCGGGTGCGGCACTCGCTACCTCAGGCACCGCTTTCCAGG
CTGTGACACGAAATCCACTGGCAGACCCTGGAATCTTCGGTGTTCTTGCGGGCGCGTCTCTCGCAGTGGTCATCAGCCTT
ACGTTCTTTAACGTCAGTCGTACGCTTCCGACCATGCTTATTGCGTCGGCGGGTGCTTTCGCTGCTGCGGTGTTTGTCTA
CAGTGTGGGCTCGATTGGTCGCGGCGGCGCCACACCGCTCAAGCTCGCGCTTTCCGGTGCTGCCACGGCTGCCGCTTTGT
CCAGCTTGACCAGCGCCATCCTGTTGCCCCGCGCCAATGTCATGGACGAGTTCCGCAATTGGCAGATTGGTACCGTCAGC
GGTGCGCAGTGGGAATCGCTCGCGGTGGCGCTGCCGCTGCTTGGGCTCGGCTTCGCCATAGTGTTTCTCACCAGCAGTGG
CCTTAACGCCCTGTCCCTCGGCGATGATGTCGCCACCAGCTTGGGCATTAACCTCACTCGCACGCGGATCTTGGTCACGC
TCGGCGCAGTCTTGCTTTGCGGAACTGCCACAGCCGTCACCGGCCCGATTGCCTTCGTCGGGCTAATCGTCCCGCACGTC
CTGCGCCTACTGCTCGGCACGGACCACCGCATCCTAATCCCAGCAAGTGCGCTGGCAGGCGCCGTATTACTGACACTCGC
AGACATCGCAGGACGCCTCCTTGGAGGCTCCTCCGAGATCGCCGTCGGCATTATCATGCCGTTCCTCGGCGCGCCACTGT
TCATCTGGATTGTGCGACAGACAAGGATGCGCGAACTATGA

Protein sequence : 
MFGVRSITPAEALSALGGATDTAGEAAAWTRIPRTLLALCAGAALATSGTAFQAVTRNPLADPGIFGVLAGASLAVVISL
TFFNVSRTLPTMLIASAGAFAAAVFVYSVGSIGRGGATPLKLALSGAATAAALSSLTSAILLPRANVMDEFRNWQIGTVS
GAQWESLAVALPLLGLGFAIVFLTSSGLNALSLGDDVATSLGINLTRTRILVTLGAVLLCGTATAVTGPIAFVGLIVPHV
LRLLLGTDHRILIPASALAGAVLLTLADIAGRLLGGSSEIAVGIIMPFLGAPLFIWIVRQTRMREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 1e-35 47
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irp1B YP_005143647.1 Fe3+-siderophore ABC transporter permease VFG0926 Protein 2e-23 46