Gene Information

Name : spaA (CDPW8_1978)
Accession : YP_005143527.1
Strain : Corynebacterium diphtheriae PW8
Genome accession: NC_016789
Putative virulence/resistance : Virulence
Product : surface-anchored protein fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2098015 - 2099592 bp
Length : 1578 bp
Strand : -
Note : -

DNA sequence :
ATGACTGTACGGGGGTGTCGTCTGGCGACGCTTGCAACGACTTTGACATTGGTTGTATCAAGCGCCACACTTGCCTCAGT
GTTTGCTGAAGAGACGCGGTACCATGCAGCCCAACTAGGAGAGAGTCCTCTCGGCGTTGACCGCCTTAGTATCCCAGAAC
GTACGAGTATTGCCGTGCATGCATTGATGGGACTGCCTACGGGACAGCCGGCTAATGGTACGAAGATCGATTCTCACAAC
TTTCCAGAAGTAGATGGTATTCCTTTTACTCTCTATCGAGTCAACAATATCGATCTAACTAAACAAGAAGGCTGGGATGC
GGCCTCGAAGATCAAGCTGGAAGAGCTTTACGTAAACGGCACACCAACCGGCAAAGTAACCAAAGTCGCCACCAAGAAAA
CCGAACGCGGCGTGGCAAAATTCGATAATCTCGAACCAGCTCTCTACCTCGTCGTTCAAGAGCTCAACGGCGCAGAGGCG
GTGGTGCGTTCGCAACCGTTCTTGGTGGCAGCGCCACAGACAAACCCTACTGGCAACGGCTGGCTCCAAGATGTGCACGT
ATACCCCAAGCACCAGGCTTTGTCTGCGCCTGTAAAAACTGCTGTGGATCCGGATGCCACGCAGCCAGGTTTCTCTGTAG
GGGAGAACGTGAAGTATCGCGTGGCTACCAAGATCCCAGAAATCGCTGCGAACACTAAGTTCGAGGGCTTCACCGTGGCG
GATAAACTCCCCGCTGAATTGGGCGAACCAGACACTAATAAAATAACAGTAACCCTTGGGGGAGAGCCGATTAATTCCAC
CGACCTCTTGGTCCAAACCTATCAAGTCGGTGACCGCACCGTACTCAGCGTGCAACTAGCCTGCGCAACACTCCAATCCT
TGGATCAGCATAAAAATGAAGAGCTCGTCGTTGAGTTCGAGGCACCAGTGACCAAGCAGCCAGAAAACGGCCAGCTAGAT
AACCAAGCGTGGGTGTTGCCGAGTAACCCCACTGCTCAGTGGGATCCAGAAGCGGATGGCGATCCTGTGCTCCCCGCTGT
TGCGTCGTCACGCGTGAGTTCCAAGTTCGGTCAGATCACCATTAATAAGGCCTTTGACGGCAGTACCCCAAGCGCCGATC
GCACCGCGACTTTCCAGCTCCATCGTTGCGAGGCCGACGGCAGCCTAGTCAAGTCCGACCCACCGATCTCCCTTGATGGC
AAGAAGGAGTTTGTTACCGGCCAAGACGGGAAGGCCGTACTCAGCGGTATCCACTTGGGCACCTTGCAGCTCGAGTCCAA
TGTTATGAAATACACCGACGCGTGGGCCGGCAAGGGAACCGAATTCTGCCTAGTAGAAACAGCTACTGCCAGAGGATATG
AGCTGTTGCCTAAGCCAGTGATAGTAAAGCTGGAAGCCAACCAGTCGACCAACGTCCTAGTAAAGCAAGAAGTCAAGATC
ACCAACAAGAAAAAGAATGCCGGATTTGAACTGCCACTTACAGGTGGTTCGGGACGCATCGCCATCACTATCGGCATCGT
TGGTTTGCTCGTCGCCCTTGCAAGCTATGTGCTGTCGCGTCGAAAGGACAACCGCTAG

Protein sequence :
MTVRGCRLATLATTLTLVVSSATLASVFAEETRYHAAQLGESPLGVDRLSIPERTSIAVHALMGLPTGQPANGTKIDSHN
FPEVDGIPFTLYRVNNIDLTKQEGWDAASKIKLEELYVNGTPTGKVTKVATKKTERGVAKFDNLEPALYLVVQELNGAEA
VVRSQPFLVAAPQTNPTGNGWLQDVHVYPKHQALSAPVKTAVDPDATQPGFSVGENVKYRVATKIPEIAANTKFEGFTVA
DKLPAELGEPDTNKITVTLGGEPINSTDLLVQTYQVGDRTVLSVQLACATLQSLDQHKNEELVVEFEAPVTKQPENGQLD
NQAWVLPSNPTAQWDPEADGDPVLPAVASSRVSSKFGQITINKAFDGSTPSADRTATFQLHRCEADGSLVKSDPPISLDG
KKEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETATARGYELLPKPVIVKLEANQSTNVLVKQEVKI
TNKKKNAGFELPLTGGSGRIAITIGIVGLLVALASYVLSRRKDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2013 NP_940344.1 surface-anchored fimbrial subunit Not tested Not named Protein 0.0 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaA YP_005143527.1 surface-anchored protein fimbrial subunit VFG2201 Protein 0.0 90