Gene Information

Name : xerD (CDPW8_1165)
Accession : YP_005142725.1
Strain : Corynebacterium diphtheriae PW8
Genome accession: NC_016789
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1200645 - 1201580 bp
Length : 936 bp
Strand : +
Note : -

DNA sequence :
ATGGGCTCAATAAGTAATATTGCTCGTCAATGGCTAACTCACTTAGCAGTGGAAAAAGGAGTTAGCGATAACACATTGTC
TAATTATCGTCGTGATCTTGAACGATATACACGGTGGCTGCAAGTACAGGGAATCACAGAAATTGAGAATATCTCCCCAC
AAGATATTGAAAGATATGTTCAAGAGTTGCGTAAGGGGGATAGTGATACTGGAAAAAAACCTCTAGCTGACTCATCTGCT
GCGCGAGCTTTGATTGTTGCTCGTGGTCTACATCGTTTTGCATTGTTAGAAAACTTAGTGGAGAACGATGTATCTGCTGA
TGTCTCTCCACCTGCAATGGGGCGTCACCTGCCTGATACCCTCTCAGTCGAGGAAGTGAATCGTCTAATAGAAGCTATAC
CCATAGATGATGCGGCTTCGCCAGAAAATCTTAGGGATTGCGCTCTACTGGAGTTCCTCTATGCTACTGGAGCCCGCATT
TCGGAAGCAGTAGGTCTAGTGGTGGACGACGTGGCTGCAATTGTCGAAAATGAAGGCATTGTCCGAATAACTGGAAAGGG
CAACAAACAGCGTATTGTGCCTGTTGGCGATCAGTGTTTGTCCGCGCTCGAGCGATATGTAGTGAGAAGCAGACCGGCAA
TGTCAAAAGGGAAATCGCACGCACTTTTCCTTAATAAACGTGGCGGACAATTATCTAGACAAAGCGCTTGGCAAATTCTC
AAAAACTCAGCTCAACGCGCAGGAATTGAAAAAGATATTTCTCCACATACTTTGCGCCATAGTTTTGCCACTCATCTTTT
AGAAGGTGGGGCTGATGTTCGAGTAGTGCAAGAATTGTTAGGGCATTCGTCGGTCACGACTACACAGATATACACCCATG
TAACTGCCGATAATCTACGATTGGTCTGGTCTCGTTCACATCCGCGTGCTCACTAA

Protein sequence :
MGSISNIARQWLTHLAVEKGVSDNTLSNYRRDLERYTRWLQVQGITEIENISPQDIERYVQELRKGDSDTGKKPLADSSA
ARALIVARGLHRFALLENLVENDVSADVSPPAMGRHLPDTLSVEEVNRLIEAIPIDDAASPENLRDCALLEFLYATGARI
SEAVGLVVDDVAAIVENEGIVRITGKGNKQRIVPVGDQCLSALERYVVRSRPAMSKGKSHALFLNKRGGQLSRQSAWQIL
KNSAQRAGIEKDISPHTLRHSFATHLLEGGADVRVVQELLGHSSVTTTQIYTHVTADNLRLVWSRSHPRAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-39 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-39 44