Gene Information

Name : ciuD (CDHC04_0490)
Accession : YP_005139801.1
Strain : Corynebacterium diphtheriae HC04
Genome accession: NC_016788
Putative virulence/resistance : Virulence
Product : putative iron transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 501464 - 502276 bp
Length : 813 bp
Strand : +
Note : -

DNA sequence :

ATGGACCGTAATTCCACAGCAACAATGCCGCAACAGTCCTTGGGCTGTATGTCGATGTCTGCAGGGTACGGGGCAGAATT
GATTGTTCGAGATGTTTCGCTCGACGTTCCAGCGGGCAAGATTACCGCGTTGATCGGGCCAAACGGTAGCGGAAAGTCGA
CCCTGCTGAAGGTGCTTGGCAGGCAGCTGCGTGCAGAAAGCGGCCAGGTGACGTTGGATGGCCGAGATATTGCGGATTTT
GGTGCGCGGGAGTTCGCACGGAATCTTGCATTCCTTCCGCAACAGCCGGTGGTACCAGACGGCATGACGGTGCGTGAGCT
TATTTCTTTTGGACGCTATCCATATTCGGGCGCGTTTGCGTCGTTAAGCGCGGCAGATCATGCTGCCATTGAGCGGGCTG
CTGCGGCGACGAGTATCACTGAGTTTTTGGACGCCGATGCCATGGCATTGTCCGGTGGGCAAAAACAACGCATGTGGATC
GCGGTCACCCTGGCGCAAGAAACCGGAATTTTGCTTCTCGACGAACCCACGACCTTCCTTGATCCTGCGCATCAATTGGC
GATTCTTGATCTGGTTCATGAGCTGAATCAGCAAGGCCGCACGATTGTGATGGTGTTGCATGATATGGCGCATGCGGCAA
AGTATTCCGACCATGTGGTGGTGATGAAAAATGGGGAAGTTTTGCAGCAAGGGCCAACGCAGTCAACGTTGGATTCTGGG
CTGATTGAGCAGGCTTTTGGTATTTCTACCATGATGGTGACCGATCCAGAGACGAGTCGCCAACTTCCGATTGCCTATGG
CATCAAACGATAG

Protein sequence :

MDRNSTATMPQQSLGCMSMSAGYGAELIVRDVSLDVPAGKITALIGPNGSGKSTLLKVLGRQLRAESGQVTLDGRDIADF
GAREFARNLAFLPQQPVVPDGMTVRELISFGRYPYSGAFASLSAADHAAIERAAAATSITEFLDADAMALSGGQKQRMWI
AVTLAQETGILLLDEPTTFLDPAHQLAILDLVHELNQQGRTIVMVLHDMAHAAKYSDHVVVMKNGEVLQQGPTQSTLDSG
LIEQAFGISTMMVTDPETSRQLPIAYGIKR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	3e-115	99
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	4e-91	69
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	4e-91	69
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	4e-91	69
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	4e-91	69
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	4e-47	43
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	4e-45	43
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	6e-45	41
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	6e-45	41
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	6e-45	41
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	6e-45	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ciuD	YP_005139801.1	putative iron transport system ATP-binding protein	BAC0164	Protein	2e-47	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ciuD	YP_005139801.1	putative iron transport system ATP-binding protein	VFG1042	Protein	2e-47	43
ciuD	YP_005139801.1	putative iron transport system ATP-binding protein	VFG0925	Protein	2e-47	41