Gene Information

Name : CDHC04_0239 (CDHC04_0239)
Accession : YP_005139550.1
Strain : Corynebacterium diphtheriae HC04
Genome accession: NC_016788
Putative virulence/resistance : Resistance
Product : ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 243101 - 244348 bp
Length : 1248 bp
Strand : +
Note : -

DNA sequence :
GTGACGCGTGCCAAACTACCCCTCCACATCACGTTCCTGCTGGTCACCCAAATGCTATTTAGTATTGGGTTTTACCTCGT
CGTGCCATTCTTGGCCGTGCAACTATCCGAAAACCTAGGTGCCTCGGGCGCCATAGTGGGACTAGTGCTAGGAATTCGCA
CCTTTAGCCAACAGGGATTGTTCTTCTTCGGTGGTGGGTTAGCAGACAAATTTGGCGCAGGCCCCATCCTGCTGATCGGC
GTAGCCATCCGAGTGATCGGGTTTCTTACCGTCGGCATGGCCGAAACCGTCACACTGATGACTCTCGGCGTGGTTCTCAT
CGGTTTTGCCGCAGCACTGTTCTCGCCGGCCGTGGAATCCATCTTTGCCGCCGAAGGCCACCGCCTAGAAAAACTCGGTG
TGATAACCCGCGCACGCCTTTTTGCCCTCGACGCAGCCTACTCCCGCATAGGAACACTGACCGGTCCCGTGATCGGCGCA
GTGCTTATCCCCCTAGGATTTGCCACCGTTTCTATCGCAGGCGCAGCCATCTTTGGCAGCATCTTTGTCATACATCTCGC
GCTGCGCCGCACATGGACGGCCGCAGCGCAACCACAACGCACACACGCCCCCAGCATGGTGGCGGTATGGGGTGAGGTGA
TCCGCAACAAGAAGTTCGTCGTCTTCGCACTGCTGTATTCCACCTATTTGCTGGCCTACAACCAGCAATACCTCTCACTT
CCGGTGGAACTGCGAAGGGCGACTGGTTCCGACGAGGCACTGGGATGGTTCTTTGCCGTCTCGGCAGTGTTCGTGATCGC
CTTGCAATCTCGGGTGACGCGCTGGGCGGAACGCCAAGCAGCCGCCGCAGCGCTTGGTGGTGGGTTCGGCCTTATGGCTT
TGAGCTTTGCGGTGGTCGCGGTGGCGTCGATAAGCCTCGAGTTGGAGGGGTGGATCGCCTATGTGCCGGCGGCCGTCATG
ATGATTTTGCTGCATACAGGCATCATGATCGCCGTGCCGATCGCACGCGACCTCGTAGGCGACCTCGCAGGAAACAACAA
TCTTGGGTCCTATTACGGATTCCTCAACAGCTTCGGCGGGCTGGCGGTGCTACTCGGATCACTCACCGTAGGAGCAACAC
TCGACCACGCCGAAACCACACAACCGATGGCCGCCATCCCGTGGCTCATCATGGTTGCAGTGCTCGCCGTCTCCGCAGTG
GGACTGGCACAACTGAAAGAAAAACAGAAAGTAGACATCACACAATGA

Protein sequence :
MTRAKLPLHITFLLVTQMLFSIGFYLVVPFLAVQLSENLGASGAIVGLVLGIRTFSQQGLFFFGGGLADKFGAGPILLIG
VAIRVIGFLTVGMAETVTLMTLGVVLIGFAAALFSPAVESIFAAEGHRLEKLGVITRARLFALDAAYSRIGTLTGPVIGA
VLIPLGFATVSIAGAAIFGSIFVIHLALRRTWTAAAQPQRTHAPSMVAVWGEVIRNKKFVVFALLYSTYLLAYNQQYLSL
PVELRRATGSDEALGWFFAVSAVFVIALQSRVTRWAERQAAAAALGGGFGLMALSFAVVAVASISLELEGWIAYVPAAVM
MILLHTGIMIAVPIARDLVGDLAGNNNLGSYYGFLNSFGGLAVLLGSLTVGATLDHAETTQPMAAIPWLIMVAVLAVSAV
GLAQLKEKQKVDITQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1562 YP_005681823.1 MFS-type drug efflux transporter Not tested PiCp 6 Protein 8e-121 75
CpC231_1564 YP_005683922.1 MFS-type drug efflux transporter Not tested PiCp 6 Protein 3e-121 75
CpI19_1569 YP_005686011.1 MFS-type drug efflux transporter Not tested PiCp 6 Protein 3e-121 75
cpfrc_01569 YP_003783969.1 hypothetical protein Not tested PiCp 6 Protein 2e-121 74