Gene Information

Name : CDHC04_1959 (CDHC04_1959)
Accession : YP_005141268.1
Strain : Corynebacterium diphtheriae HC04
Genome accession: NC_016788
Putative virulence/resistance : Unknown
Product : transposase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2094315 - 2095664 bp
Length : 1350 bp
Strand : -
Note : -

DNA sequence :
ATGACTACCGTGTCACCGAGGAAAGGTCATGACCCGAACAGGGTCAACGAGATCAGCGCTAAGCTGATGGAAAATCCGGA
AATCGCCGAACTGATCGGCGAGTTGTCGACTTCCACCGATGATGCCAGCGACCTGGTCAAAGGTCTTTTGCAGGCATCGA
TCAACGCTGGTCTGCAGGCTGAAATGGACGCGCATCTGGGATACGCGCACTCTGATCGTACGGCGAAAGCCCAGCTGGGC
ACCCCGGATGGTGGCAATCACCGCAACGGGTCGTACACCAAAACCGTCAACTCTGGCTACGGCACCTTTGATGTGACTAT
GCCCCGGGATCGAGCTGGCACGTTTACGCCGCGGATGCTGCCTAAAGGCACCCGCCGTCTGACGGAGCTTGATGACATGA
TCATCTCCCTGTACGCCGGTGGGATGACCGTGCGCGATATTCAGCACCACCTCGCCACCACCCTCGGGGTGGATATGAGC
CCAGATACGATCAGCACCATTACCGACGCGGTGTTAGAAGAGGTCATGATCTGGCAAAACCGCCAGCTCGACGAGTTCTA
CCCAGTGATCTTCCTCGACGCGCTGCGAGTGAAGATCCGCGATGGCCACCGCGTGGTCAACAAGTCTTGCTACATGGCGG
TAGGCGTCGACATGGACGGCATCAAGCACATCCTGGGATTGTGGATCGCAGACAATGAAGGCGCCAGTTTTTGGGCATCC
GTGTGCGCTGACCTTGCCAACCGTGGGGTCCAAGACGTGTTCATCGTCTGCTGCGACGGGCTCAAAGGCCTGCCGGAAAC
CGTGGAGGCAACCTGGCCGAATTCCATGGTGCAGACCTGTATAGTGCACCTGATCCGGGCGGCCAACAGGTGGGTGTCCT
ACCAAGACCGCAAACCCGTATCAAGTGCGCTACGGGAGGTCTACACCGCACCGACCGAGGACACCGCCCGCGCCGCCCTG
GACGCATTCGAGGCCAGTGAACTGGGCCGTAAATACCCGCAATCGGTCAAAGTCTGGCGCGACGCCTGGGACCGGTTTGT
GCCATTTTTGCAGTTCCCACCTGCGGCACGGCGGGTACTCTACACCACGAATTCGATCGAATCGCTGAATGCTGAGCTGC
GGAAAGCCACCCGCAACCGCGGCCAGTTCCCGAACGATACCGCGGCGCTGAAAACGCTGTGGCTGATGATCTGCAACATC
GAGGACAAGCGCGCTGCCCAGCGAGCGAAGAAAGCGAAGCGCGCCATCGAATGCAACGGCTATATTGAAGGAGCGAAAGC
CACCGGGTGGAAACAAGCCATCAACCAACTAGCCGTGGCTTACCCCGACCGATTCGCGGACTACTTGTAA

Protein sequence :
MTTVSPRKGHDPNRVNEISAKLMENPEIAELIGELSTSTDDASDLVKGLLQASINAGLQAEMDAHLGYAHSDRTAKAQLG
TPDGGNHRNGSYTKTVNSGYGTFDVTMPRDRAGTFTPRMLPKGTRRLTELDDMIISLYAGGMTVRDIQHHLATTLGVDMS
PDTISTITDAVLEEVMIWQNRQLDEFYPVIFLDALRVKIRDGHRVVNKSCYMAVGVDMDGIKHILGLWIADNEGASFWAS
VCADLANRGVQDVFIVCCDGLKGLPETVEATWPNSMVQTCIVHLIRAANRWVSYQDRKPVSSALREVYTAPTEDTARAAL
DAFEASELGRKYPQSVKVWRDAWDRFVPFLQFPPAARRVLYTTNSIESLNAELRKATRNRGQFPNDTAALKTLWLMICNI
EDKRAAQRAKKAKRAIECNGYIEGAKATGWKQAINQLAVAYPDRFADYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 0.0 100
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 0.0 91
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 5e-162 72
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-73 42
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 3e-72 42