Gene Information

Name : spaA2 (CDHC04_1926)
Accession : YP_005141235.1
Strain : Corynebacterium diphtheriae HC04
Genome accession: NC_016788
Putative virulence/resistance : Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2061829 - 2063406 bp
Length : 1578 bp
Strand : -
Note : Predicted outer membrane protein

DNA sequence :
ATGGCTGTACAGAGGTGTCGTCTGGCGACACTTGCGACGACTTTGACATTGTTTGTATCAAACGTCACACTTGCCTCAGT
GTTTGCTGAAGAGTCACAGTATCATGCAGTCCAACTAGGAGAGAGTCCTCTCAGCGTTGACCGCCTTAGTATCCCAGAAC
GTACGAGTATTGCCGTGCATGCATTGATGGGACTGCCTACGGGACAGCCGGCTAATGGCACGAAGATCGATTCCCCCAAG
TTACCAGAAGTAGATGGTATTGCTTTTACTCTCTATCGAGTCAACAATATCGATCTAACTAAACAAGAAGGCTGGGATGC
GGCCTCGAAGATCAAGCTGGAAGATCTTTACGTAAACGGCACACCAACCGGCAAAGTAACCAAAGTCACCACCAGGAAAA
CCGAAGGCGGCGTGGCAAAATTCGATAATCTCACACCAGCCCTCTACCTCGTCGTTCAAGAGCTCAACGGCACAGAGGCC
GTGGTGCGTTCGCAACCGTTCTTGGTGGCAGCGCCACAGACCAACCCTACTGGCAACGGCTGGCTCCGAGAAGTACACGT
ATACCCCAAGCACCAGGCTTTGTCTGCGCCTGTAAAAACTGCTGTGGATCCGGATACCACGCAGCCGGGTTTTTCTGTAG
GGGAAAACGTGCGGTATCGCGTGGCTACCAAGATTCCAGAAATCGCTCCGAACACTAAGTTTGAGGGCTTCACCGTGGCG
GATAAGTTGCCTGCTGAACTGGGCGAACCAGACACTAATAAAATAAAGGTCACCCTTGGGGGAGAGCCGATTAATTCCAC
CGACGTCTCTGTTCAAACCTATCAAGTCGGTGACCGCACCGTACTCAGTGTGCAATTAACTGGCGCAGCTCTGAGCACCT
TGGATCAGCATAAAAATGAAGAGCTCGTCGTTGAGTTCGAGGCACCTGTGACCAAGCAGCCAGAAAACGGCCAGCTAGAT
AACCAAGCATGGGTGCTGCCAAGTAACCCCACTGCTCATTGGGATCCAGAAGACGGTGGCGATGCTGCGTTGCGCGGTAT
GCCGTCGTCACGCGTGAGTTCCAAGTACGGTCAGATCACCATTAATAAGGCCTTTGACGGCAGCACCCCAAGTGCCGATC
GCACCGCGACGTTCCAGCTACATCGTTGCAAGGAAGACGGCAACCTAGTCGAATCCGACGCCCCAATTTCTCTTAATGGC
AAGCAAGAGTTTGTTACCGATCAAGACGGTAAGGCCGTACTCAGCGGTATCCACTTGGGCACCTTGCAGCTGGAGTCCAA
TGTTATGAAATACACCGACGCGTGGGCCGGCAAGGGAACCGAATTCTGCCTAGTAGAAACAGCTACTGCCAGAGGATATG
AGCTGTTGCCTAAGCCAGTGATAGTAAAGCTGGAAGCCAACCAGTCGACCAACGTCCTAGTAAAGCAAGAAGTCAAGATA
ACCAACAAGAAAAAGAACGCCGGATTTGAACTGCCACTCACAGGTGGTTCGGGACGCATCGCCATCACTATCGGCATCGT
TGGTTTGCTCGTCGCCCTTGCAAGCTATGTCGTATCGCGTAGGAAGGACAACCGCTAG

Protein sequence :
MAVQRCRLATLATTLTLFVSNVTLASVFAEESQYHAVQLGESPLSVDRLSIPERTSIAVHALMGLPTGQPANGTKIDSPK
LPEVDGIAFTLYRVNNIDLTKQEGWDAASKIKLEDLYVNGTPTGKVTKVTTRKTEGGVAKFDNLTPALYLVVQELNGTEA
VVRSQPFLVAAPQTNPTGNGWLREVHVYPKHQALSAPVKTAVDPDTTQPGFSVGENVRYRVATKIPEIAPNTKFEGFTVA
DKLPAELGEPDTNKIKVTLGGEPINSTDVSVQTYQVGDRTVLSVQLTGAALSTLDQHKNEELVVEFEAPVTKQPENGQLD
NQAWVLPSNPTAHWDPEDGGDAALRGMPSSRVSSKYGQITINKAFDGSTPSADRTATFQLHRCKEDGNLVESDAPISLNG
KQEFVTDQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETATARGYELLPKPVIVKLEANQSTNVLVKQEVKI
TNKKKNAGFELPLTGGSGRIAITIGIVGLLVALASYVVSRRKDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2013 NP_940344.1 surface-anchored fimbrial subunit Not tested Not named Protein 0.0 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaA2 YP_005141235.1 putative surface-anchored fimbrial subunit VFG2201 Protein 0.0 89