Gene Information

Name : spaB1 (CDHC04_1884)
Accession : YP_005141193.1
Strain : Corynebacterium diphtheriae HC04
Genome accession: NC_016788
Putative virulence/resistance : Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2013334 - 2013951 bp
Length : 618 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAATAACGCTCTCAACGCCGCAGTGCTCAGCCTCGCACTGCTCACCGGAACCACACCCGCACACGCACAAGAAGC
AAACACATTGGTCATTGACCTCGAACCACCCGCAGCATTCGCCGACGACCAACCCCAAGGTCACAACATCGACGTCACCG
TAGCAAAACTTCACAACATCGACCCCGAAGACCACGAACGCATCCGTAACCTCCAACGCAACGGCGTACCCAACACCATC
AGCGAAGAACAACCCCACACCGCGCGTACCGACGCCACCGGCACCGCCACCATCACCAACCTGCCACCAGGGGCCTACGT
AATCCGCGACACCAACACCACGAAGCCGCGCTTTAGCCCCCTCGTGATCCCACTCGGTATCGACACAACCAGCCCCACCA
TGACCCTCCGCCCCAAGCTTATCGACGCCACCCCCGGCGCGCCGAACGTGCCTAGCGTACCTAGCCCGCCGAGCGTGACT
GCTCCGGCTCCGAAAAAGACACCACCGCGACTGGCCTTCACCGGCGCAAGCATCCTCGGACTGCTAGCTATCGCCACCAT
CAGCACCCTCATCGGAATCGCACTACTACGCACTCGACGTGCAGAAAAGAAAGGATAA

Protein sequence :
MKNNALNAAVLSLALLTGTTPAHAQEANTLVIDLEPPAAFADDQPQGHNIDVTVAKLHNIDPEDHERIRNLQRNGVPNTI
SEEQPHTARTDATGTATITNLPPGAYVIRDTNTTKPRFSPLVIPLGIDTTSPTMTLRPKLIDATPGAPNVPSVPSPPSVT
APAPKKTPPRLAFTGASILGLLAIATISTLIGIALLRTRRAEKKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2011 NP_940342.1 surface anchored protein Not tested Not named Protein 6e-69 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaB1 YP_005141193.1 putative surface-anchored fimbrial subunit VFG2200 Protein 2e-69 98