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Name : clpC (CDHC04_1852) Accession : YP_005141161.1 Strain : Corynebacterium diphtheriae HC04 Genome accession: NC_016788 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1977330 - 1979966 bp Length : 2637 bp Strand : - Note : - DNA sequence : ATGTTCGAGCGGTTTACCGATCGTGCACGTCGCGTTATCGTTCTGGCACAGGAAGAAGCGCGCGGCCTCAATCACAATTA CATCGGCACCGAGCACATCCTGCTCGGACTTATTCACGAGGGCGAGGGCGTGGCCGCTAAGGCGCTCGAGTCCATGGGCA TCTCCCTTGAAGCAGTACGCCAAGAGGTAGAAGAAATCATCGGCCACGGCTCCGAGCCACCAGCCGGCCACATTCCTTTT ACTCCACGTGCCAAGAAGGTACTTGAGCTCTCCTTGCGTGAGGGTCTGCAGATGGGACATAAGTACATCGGTACTGAGTT CCTGCTGCTCGGCCTTATCCGTGAGGGCGATGGCGTAGCCGCACAAGTTTTGGTCAAGCTCGGCGCTGACCTGCCCCGTG TACGCCAGCAGGTTATTCAGCTTCTTTCCGGCTACGAGGGTGGCGAAAGCCCAGAAAACAATAACGACGGCGAGGCTGTG GGTGCTGGTACTGGCGCTGGCCGTGCTGGCCGCGGTGGTGGCGCAGGCGAGCGCTCCAACTCCTTGGTTTTGGACCAGTT TGGTCGCAACCTCACCCAGGCTGCTAAGGAAGGCAAGCTGGATCCTGTGGTGGGTCGTGAGCAGGAAATTGAGCGCATCA TGCAGGTGCTCTCACGTCGTACCAAGAACAACCCAGTTCTTATCGGTGAGCCAGGTGTTGGTAAGACCGCTGTTGTAGAA GGCCTAGCTCTAGACATCGTTAATGGCAAGGTGCCAGAAACGCTGAAAGACAAGCAGGTTTACTCTCTTGACCTCGGCTC CTTGGTGGCAGGTTCGCGCTACCGTGGTGACTTCGAAGAGCGCCTGAAGAAGGTTCTCAAGGAGATCAATCAGCGTGGCG ACATCATCTTGTTCATCGATGAGATCCACACCCTCGTCGGTGCCGGTGCCGCAGAAGGCGCTATCGACGCTGCCAGCTTG CTCAAACCAAAACTGGCTCGTGGTGAGCTACAGACCATCGGTGCTACCACTTTGGACGAGTACCGCAAGCACATCGAAAA GGACGCCGCACTTGAGCGTCGTTTCCAGCCAGTGCAGGTTCCAGAGCCTTCCGTCGATATGACCATCGAGATCCTCAAGG GTCTACGCGACCGCTACGAGGCACACCACCGCGTCTCCATCACCGATGGGGCTCTCGCAGCAGCAGCACAGCTGTCCGAT CGCTACATCAACGATCGCTTTTTGCCGGATAAGGCCGTTGACCTTATCGACGAAGCCGGCGCACGCATGCGTATCAAGCG CATGACCGCACCGGAATCCATCCGCAAGGTAGACGATCAGATCGCGGAAGTCCGTCGTGAGAAGGAAGCCGCAATCGACG CCCAAGACTTTGAAAAGGCCGCAGGCCTGCGCGACACCGAGCGCAAGTTAGGCGAAGAGCGTGCTGAGAAAGAAAAGCAG TGGCGCTCCGGCGACCTAGAAGACATCGCCGAGGTCGGCGAGGAACAAATCGCTGAGGTCCTGGGTAACTGGACTGGTAT CCCAGTGTTCAAGCTGACCGAGGAAGAATCCTCCCGTCTGCTGCACATGGAAGAGGAGCTACACAAGCGCATCATCGGCC AAGACGATGCCGTCAAGAGTGTTTCTCGCGCCATCCGCCGCACCCGCGCTGGCCTCAAGGACCCACGCCGTCCTTCCGGC TCCTTCATCTTCGCCGGCCCGTCTGGTGTGGGTAAGACCGAGCTATCCAAGTCACTGGCCAACTTCCTGTTCGGCGACGA CGACGCCCTAATCCAGATCGACATGGGCGAGTTCCACGACCGCTTCACCGCATCCCGTCTCTTCGGTGCCCCTCCAGGAT ATGTAGGCTACGACGAAGGCGGTCAGCTCACCGAGAAGGTCCGTCGCAAGCCATTCTCCGTCGTGCTTTTCGACGAAATC GAAAAGGCGCACAAGGAGATCTACAACACCTTGCTGCAGGTCCTCGAAGAAGGTCGCCTCACCGACGGCCAAGGCCGCGT GGTGGACTTCAAGAACACCGTGCTGATCTTCACCTCCAACCTAGGTACCCAAGACATCTCTAAGGCTGTGGGCATGGGCT TTAGCTCTGTCGGCGAGCACGATGCCGACGGCCAGTACGACCGCATGAAGCAGAAGGTCAACGACGAGCTGAAGAAGCAC TTCCGCCCTGAGTTCCTCAACCGTATCGACGAAATCGTGGTCTTCCACCAGCTCACCCAAGAGCAGATCGTCGAAATGGT AGACCTGCTCATCGGACGCGTATCCAAGGCACTTGCTCAAAAAGACATGGGCATCGAGCTCACCGAAAAGGCCAAGAACC TGCTGGCAAAACGTGGATTCGATCCAGTACTGGGTGCACGACCACTGCGTCGCACCATCCAGCGCGAGATCGAAGACGTA CTCTCCGAGAAGATCCTCTTCGGTGAGGTCGGCGCTGGTGAGATCGTCACCGTGGATGTTGAAGGCTGGGACGGCGAATC CAAGGAAACCGACAAGGCTTCCTTCACCTTCACCCCACGCGTGAAGCCGCTGCCAGACGAGTTCGAAGAGGCAACCCCAT CTGAGGAAGCTCAAGAAGCAGTGATTAACGCTGCTGAGACTGAGGTTCCAGAAGAAGAAGCCAACATCGAAAACTAA Protein sequence : MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGSEPPAGHIPF TPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVIQLLSGYEGGESPENNNDGEAV GAGTGAGRAGRGGGAGERSNSLVLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVE GLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASL LKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSD RYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKLGEERAEKEKQ WRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRTRAGLKDPRRPSG SFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEI EKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISKAVGMGFSSVGEHDADGQYDRMKQKVNDELKKH FRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDV LSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLPDEFEEATPSEEAQEAVINAAETEVPEEEANIEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 99 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005141161.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_005141161.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 2e-150 | 50 |
