Gene Information

Name : frgB (CDHC03_0963)
Accession : YP_005138012.1
Strain : Corynebacterium diphtheriae HC03
Genome accession: NC_016787
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake system transmembrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1001477 - 1002436 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGCGTGCACTCGTCATACTCTCCTCCCTCCTCCTAGTCACCGCGGCATACAGCTTGGTAATTCCCGGAGCCGGACTAAG
TACTTGGCAGCTTCTCACCAGCGAAACCCCATTAGCACACACGGTTGTCATGCAGTGGCGCTTGCCTCGAGTGGTCACCG
GAATCCTAGTAGGCGCAGCACTCGCCATAGCAGGGTCACTATTCCAATCCCTCACACGCAACCCGCTCGGATCACCTGAC
GTCATCGGATTTTCAACCGGCGCCTACACCGGCGTAATCGCAGCCTTCCTCCATGGATGGTCAGGCTTTGGTGCCACCAT
TGTCGGTGCGCTCATCGGCGGTCTAGCAGTTTCAGTCGTGGTGATCGCACTGTCAGTCCGAACGCGTATCGACGGCCTCC
GCATCATCCTAGTAGGCCTAGGAATCTCAGCAATGCTCTCGGCCCTCAATAGGTGGCTAATCACCCGCGGAGAACTCGAC
ACAGCACTGTCTGCTGCAAGTTGGGGTGCAGGCTCACTCAATGGACTCCGCTGGACCATAGCGATACCAGCCTGCTGTGT
CCTAGCAATTCTTATCACCACAACCATTCCATTGCGGCGATTCCTCGATGTTCTTAGCCTAGGAGACGGTCTCGCTGTAG
GCCTTGGACTTCGATTGCAGTTAACCAAGCTCCTCCTCCTAGTCGGTGGAGTATTCCTCGTGGCAGCAACCACCGCTGTC
GCAGGCCCCATCGCATTTGTGGCTTTGGCGTCCCCACACATTGCCCGTGTACTAACGTCGTCTGCACGAACCCCGCTTGT
AGAGACGTCGGTAATCGGCGCTTTGCTTATTATCGTTGCCGACCTCATCGGCCAGCGACTTTTCTACCCCACCCAGCTTC
CTGTTGGCCTCGTCACCGTCACCATCGGTGGCATGTACCTGCTGTGGCTCATAGCCCGCGGCTCGAAGGAGAACTCATGA

Protein sequence :
MRALVILSSLLLVTAAYSLVIPGAGLSTWQLLTSETPLAHTVVMQWRLPRVVTGILVGAALAIAGSLFQSLTRNPLGSPD
VIGFSTGAYTGVIAAFLHGWSGFGATIVGALIGGLAVSVVVIALSVRTRIDGLRIILVGLGISAMLSALNRWLITRGELD
TALSAASWGAGSLNGLRWTIAIPACCVLAILITTTIPLRRFLDVLSLGDGLAVGLGLRLQLTKLLLLVGGVFLVAATTAV
AGPIAFVALASPHIARVLTSSARTPLVETSVIGALLIIVADLIGQRLFYPTQLPVGLVTVTIGGMYLLWLIARGSKENS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 8e-52 60
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-52 60
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 4e-52 60
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-52 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
frgB YP_005138012.1 iron-siderophore uptake system transmembrane protein VFG0928 Protein 7e-26 45