Gene Information

Name : spaB (CDHC03_1885)
Accession : YP_005138930.1
Strain : Corynebacterium diphtheriae HC03
Genome accession: NC_016787
Putative virulence/resistance : Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2019902 - 2020519 bp
Length : 618 bp
Strand : -
Note : -

DNA sequence :

ATGAAAACTAACGCCATCAGCGCCGCAGTGCTAAGCCTCGCACTCATCATCGGAGCCACACCCGCGCACACACAAGAAAC
AAACACACTGGTCATCGACCTCGAACCGCCCGCAGCATTTGCCGACGACCAACCCCAAGGCCACAACATCGACATCACCG
TAGCCAAACTCCACAACATCGACCCCCAAGACCACGAACGCATCCGCAACCTCCAACGCAACGGCGTACCCAACACCATC
AGCGAAGAACAACCCCACACCGCGCGTACCGACGCCACCGGCACCGCCACCATCACCAACCTGCCACCAGGGGCCTACGT
AATCCGCGACACCAACACCACGAAGCCGCGCTTTAGCCCCCTCGTGATCCCACTCGGTATCGACGCAACCAGTCCCACCA
TGACCCTGCGCCCCAAGCTTATCGACGTCAACCCCGGTGCACCGAACGTGCCTAACGTACCTAGTCCGCCGAGCGTGACT
GCTCCGGCTCCGAAAAAGGCACCACCGCGACTGGCATTCACCGGCGCAAGCATCCTCGGACTGCTGGCCATCGCCACCTT
CAGCACCCTCATTGGAATCGCATTACTACGCACTCGACGTGCAGAAAAGAAAGGATAA

Protein sequence :

MKTNAISAAVLSLALIIGATPAHTQETNTLVIDLEPPAAFADDQPQGHNIDITVAKLHNIDPQDHERIRNLQRNGVPNTI
SEEQPHTARTDATGTATITNLPPGAYVIRDTNTTKPRFSPLVIPLGIDATSPTMTLRPKLIDVNPGAPNVPNVPSPPSVT
APAPKKAPPRLAFTGASILGLLAIATFSTLIGIALLRTRRAEKKG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
DIP2011	NP_940342.1	surface anchored protein	Not tested	Not named	Protein	8e-66	93

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
spaB	YP_005138930.1	putative surface-anchored fimbrial subunit	VFG2200	Protein	2e-66	93