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Name : clpC (CDHC03_1844) Accession : YP_005138889.1 Strain : Corynebacterium diphtheriae HC03 Genome accession: NC_016787 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1971301 - 1973937 bp Length : 2637 bp Strand : - Note : - DNA sequence : ATGTTCGAGCGGTTTACCGATCGTGCACGTCGCGTTATCGTTCTGGCACAGGAAGAAGCGCGCGGCCTTAATCACAATTA CATCGGCACCGAGCACATCCTGCTCGGACTTATTCACGAGGGCGAGGGCGTGGCCGCTAAGGCGCTCGAGTCCATGGGCA TCTCCCTTGAAGCAGTACGCCAAGAGGTAGAAGAAATCATCGGCCACGGCTCCGAGCCACCAGCCGGCCACATTCCTTTT ACTCCACGTGCCAAGAAGGTACTTGAGCTCTCCTTGCGTGAGGGTCTGCAGATGGGACATAAGTACATCGGTACTGAGTT CCTGCTGCTCGGCCTTATCCGCGAGGGCGACGGCGTAGCCGCACAAGTTTTGGTCAAGCTCGGCGCTGACCTGCCCCGTG TACGCCAGCAGGTTATCCAGCTTCTTTCCGGCTACGAGGGTGGCGAAAGCCCAGAAAACAATAACGACGGCGAGGCTGTG GGTGCTGGTACTGGCGCTGGCCGTGCTGGCCGCGGTGGTGGCGCAGGCGAGCGCTCCAACTCCTTGGTTTTGGACCAGTT TGGTCGCAACCTCACCCAGGCTGCTAAGGAAGGCAAGCTGGATCCTGTGGTGGGTCGTGAGCAGGAAATTGAGCGCATCA TGCAGGTGCTCTCACGTCGTACCAAGAACAACCCAGTTCTTATCGGAGAGCCAGGTGTTGGTAAGACCGCTGTTGTAGAA GGCCTAGCTCTAGACATCGTTAATGGCAAGGTGCCAGAAACACTGAAAGACAAGCAGGTTTACTCTCTTGACCTCGGCTC CTTGGTGGCAGGTTCGCGCTACCGTGGTGACTTCGAAGAGCGCCTGAAGAAGGTCCTCAAGGAGATCAACCAGCGTGGCG ACATCATCTTGTTCATCGATGAGATCCACACCCTCGTCGGTGCCGGTGCCGCAGAAGGCGCTATCGACGCTGCCAGCTTG CTCAAACCAAAACTGGCTCGTGGTGAGCTACAGACCATCGGTGCTACCACTTTGGACGAGTACCGCAAGCACATCGAAAA GGACGCCGCACTTGAGCGTCGTTTCCAGCCAGTGCAGGTTCCAGAGCCTTCCGTCGATATGACCATCGAGATCCTCAAGG GTCTACGCGACCGCTACGAGGCACACCACCGCGTCTCCATCACCGATGGGGCTCTCGCAGCAGCAGCACAGCTGTCCGAT CGCTACATCAACGATCGCTTCTTGCCAGATAAGGCCGTTGACCTTATCGACGAAGCCGGCGCACGCATGCGTATCAAGCG CATGACCGCACCGGAATCCATCCGCAAGGTAGACGATCAGATCGCGGAAGTCCGTCGTGAGAAGGAAGCCGCAATCGACG CCCAAGACTTTGAAAAGGCCGCAGGCCTGCGCGACACCGAGCGCAAGTTAGGCGAAGAGCGCGCTGAGAAAGAAAAGCAG TGGCGCTCCGGCGACCTAGAAGACATCGCCGAGGTCGGCGAGGAGCAAATCGCTGAGGTTCTGGGCAACTGGACTGGTAT CCCAGTATTCAAGCTGACCGAGGAAGAATCCTCCCGTCTGCTGCACATGGAAGAGGAGCTACACAAGCGCATCATCGGCC AAGACGATGCCGTCAAGAGTGTTTCTCGCGCCATCCGCCGCACCCGCGCTGGCCTCAAGGACCCACGCCGTCCTTCCGGC TCCTTCATCTTCGCCGGCCCATCTGGTGTGGGTAAGACCGAGCTATCCAAGTCGCTGGCCAACTTCCTGTTCGGCGACGA CGACGCCCTAATCCAGATCGACATGGGCGAGTTCCACGACCGCTTCACCGCATCCCGTCTGTTCGGTGCCCCTCCAGGAT ATGTGGGCTACGACGAGGGCGGTCAGCTCACCGAGAAGGTCCGCCGCAAGCCATTCTCCGTAGTGCTTTTCGACGAAATC GAAAAGGCCCACAAGGAGATCTACAACACCTTGCTGCAGGTCCTCGAAGAAGGTCGCCTCACCGACGGCCAAGGCCGCGT TGTGGACTTCAAGAACACCGTGCTGATCTTCACCTCCAACCTGGGTACCCAAGACATCTCTAAGGCTGTGGGCATGGGCT TTAGCTCTGTCAGCGAGCACGACGCCGACGGTCAGTACGACCGCATGAAGCAGAAGGTCAACGACGAGCTGAAGAAGCAC TTCCGCCCTGAGTTCCTCAACCGTATCGACGAAATCGTGGTATTCCACCAGCTCACCCAAGAGCAGATCGTCGAAATGGT GGACCTGCTCATCGGACGCGTATCCAAGGCACTTGCTCAAAAAGACATGGGCATCGAGCTCACCGAAAAGGCCAAGAACC TGCTGGCAAAGCGTGGATTCGATCCAGTACTGGGTGCACGACCATTGCGTCGCACCATCCAGCGCGAGATCGAAGACGTA CTCTCCGAGAAGATCCTCTTCGGTGAGGTCGGCGCTGGTGAGATCGTCACCGTGGATGTTGAAGGCTGGGACGGCGAATC CAAGGAAACCGACAAGGCTTCCTTCACCTTCACCCCACGCGTGAAGCCGCTGCCAGACGAGTTCGAAGAGGCAACCCCAT CTGAGGAAGCTCAAGAAGCAGTGATTAACGCTGCTGAGACTGAGGTTCCAGAAGAAGAAGCCAACATCGAAAACTAA Protein sequence : MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGSEPPAGHIPF TPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVIQLLSGYEGGESPENNNDGEAV GAGTGAGRAGRGGGAGERSNSLVLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVE GLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASL LKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSD RYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKLGEERAEKEKQ WRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRTRAGLKDPRRPSG SFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEI EKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISKAVGMGFSSVSEHDADGQYDRMKQKVNDELKKH FRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDV LSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLPDEFEEATPSEEAQEAVINAAETEVPEEEANIEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 99 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005138889.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_005138889.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 1e-150 | 50 |
