Gene Information

Name : srtB (CDHC03_0159)
Accession : YP_005137208.1
Strain : Corynebacterium diphtheriae HC03
Genome accession: NC_016787
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 155050 - 155976 bp
Length : 927 bp
Strand : +
Note : Sortase (surface protein transpeptidase)

DNA sequence :
GTGACACCAACGCCGACGGAGGTCGTCGAAAAGCCACAACACCGCAAGCGGGCAAAAAAGAGTAATCTTTTACCGGCGCT
TTTGGTCATTGTTGGACTCATCGTGATCATCTATCCTGTTGTGTCCACCCAGTGGAACAACTGGCAGCAAAACCGCGCAG
CCGCGGAATACGCAAAACTTCAAAAAAGCGTCCCCGCCCAAGTCAGCGATAAAGAATGGGAAGACGCACACCGCTACAAC
GACGAGCGTGCCGACGGTCCCATCCTGGACCCGTGGATCGACCGCTTCGTCCCAGATAATCAGGCATATCAAGATTATCT
AGCAGTCCTGAACTCTACCGATGCGATGGGTCGACTGATCATTCCGAGCGCGAAAACGGACCTGCCTATTTATCACGGCA
CACGGGAAGACACTCTGCAACGTGGTGTCGGGCATCTCTTCGGCTCCGACCTACCCGTTGGCGGAGAAGGAACACATTCC
GTCCTGACAGGGCACACCGGCCTGCCAAACGCCACACTGTTTGACAACCTCAAGGATGTAAAAGAAAACGACTTCTTCTT
CATCCAAGTAGCCGGCCACAAACTGAAATACCAAGTAGACCAAATCAGAGTAGTGCTCCCAGACGAGGTGGAATCCCTCC
GCTCCGAGCCTGGTAAAGACTTAATCACCTTGGTTACTTGTACGCCATACGGCATCAACACTCACCGTCTTCTCGTGCGA
GGCCACCAAGTGCCCATTACCGAAGAAGAAAAGACCATGTTGGATGAAACCCAAGGCGTGGTATGGCAATGGTGGATGTA
CGCCCTCAGCGCAGTCTTTATCATCGGCCTGATCGTGCTCGGCTGGTGGCTTGCCCGCCAAGCACGACGTGCCAAGAACC
AACAACTTAATCCAGAAACCCGCCACAACAACGAAGGCGAACTGTAA

Protein sequence :
MTPTPTEVVEKPQHRKRAKKSNLLPALLVIVGLIVIIYPVVSTQWNNWQQNRAAAEYAKLQKSVPAQVSDKEWEDAHRYN
DERADGPILDPWIDRFVPDNQAYQDYLAVLNSTDAMGRLIIPSAKTDLPIYHGTREDTLQRGVGHLFGSDLPVGGEGTHS
VLTGHTGLPNATLFDNLKDVKENDFFFIQVAGHKLKYQVDQIRVVLPDEVESLRSEPGKDLITLVTCTPYGINTHRLLVR
GHQVPITEEEKTMLDETQGVVWQWWMYALSAVFIIGLIVLGWWLARQARRAKNQQLNPETRHNNEGEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-132 100
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-75 62
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-72 59
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-63 51
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-51 49
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-52 49
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-48 45
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-50 44
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-40 42