Gene Information

Name : srtC (CDHC03_0157)
Accession : YP_005137206.1
Strain : Corynebacterium diphtheriae HC03
Genome accession: NC_016787
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 151455 - 152387 bp
Length : 933 bp
Strand : -
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGGCTCGCAATAACGCGAAAAGCGATACGTCATCGCCAACCGACTCCAGTACCCAGGCAACGGGTAGCTCGCATAGGAA
GAAGAAAAAGAAGGGCAATCCCCTGATCGCCGTGCTCATCATCTTGGTGGGCGTGGGCGTGCTGCTCTACCCAGTAATTG
CCACGCAATGGAATAACTTTGGCCAGCAGCGCGCTGCGGACGAGTACGCCAAGCTGGAAAAGTCCGCGCCCCCAGAAGTA
CTCGACACCGCGTGGGAGGACGCACACCGCTATAACGAATCGCGTCCCGTCAGCGCACAGGTGATGGATGCGTGGAACGA
TCACGCCGATGAGTCCTCGCCGGAATACCAGCAATACCTGCAGTACTTGTCGCAACTGGCAGAAACTGATGCCATGGGAC
AGATCATGATTCCGTCGATTAAGTCCAAGCTGCCGATCTACCACGGCACCGGCCCCTCAGCTCTCGACCGCGGCGTGGGC
CACCTCTACGGCACCGACCTGCCCGTCGGTGGCGAAAACCGCCACGCAGTACTCTCCGCGCACACCGGCATCCAAACCGC
CACTCTGTGGGACAATCTAGTCAAAGTAAAAGAGGGCGACGCCTTCTACGTGGCAGTCTCTGGCCACAAACTCAAATACG
AGGTAGATCAGATCAAAGTGGTCGCCCCAGACCACACCGATGACCTTGGCCGCGAACCCGGCAAAGACTACATCACACTT
ATTACCTGCACCCCCTACGGCATTAACACCCACCGCCTGTTGGTGCGCGGGCACCAAGTGCCGATGGATCCCTCAGAAGA
AAAGGTCTTCGAAGAGTCCACAGTGGTATGGCAATGGTGGATGTGGGCCATCGTCGCCACAGCCGCGCTCGTACTGATCC
TGCTCGCCTGGTGGCTACGCAAGAACAGCCGCAAAGCACAGCGCGGCAACTAG

Protein sequence :
MARNNAKSDTSSPTDSSTQATGSSHRKKKKKGNPLIAVLIILVGVGVLLYPVIATQWNNFGQQRAADEYAKLEKSAPPEV
LDTAWEDAHRYNESRPVSAQVMDAWNDHADESSPEYQQYLQYLSQLAETDAMGQIMIPSIKSKLPIYHGTGPSALDRGVG
HLYGTDLPVGGENRHAVLSAHTGIQTATLWDNLVKVKEGDAFYVAVSGHKLKYEVDQIKVVAPDHTDDLGREPGKDYITL
ITCTPYGINTHRLLVRGHQVPMDPSEEKVFEESTVVWQWWMWAIVATAALVLILLAWWLRKNSRKAQRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-101 100
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-61 61
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-57 57
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 3e-58 56
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-43 48
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 6e-45 47