Gene Information

Name : CDHC03_1290 (CDHC03_1290)
Accession : YP_005138339.1
Strain : Corynebacterium diphtheriae HC03
Genome accession: NC_016787
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1367193 - 1368632 bp
Length : 1440 bp
Strand : +
Note : transposase-like protein, IS30 family

DNA sequence :
GTGGCTACCAAGGACTGGAGTAAGAAGACCAGTGATATGCCGGTGGGGGTGCGGCGTCAGTGGCGTGCGGATCGGGCGTT
GCGGCCTGCGATGCGTTCCCCGGGTAGGCCGGTTCCGTCACGGGCGGTGCAACGCCAGTTCTGGGGTCTGATCGCGACGG
GAATCACCACTGCGCAGGCCGCCCTTCAGGTGGGGGTGTCCGTACCGGTGGGAACGAGGTGGTTCCGTCATGCTGGTGGA
ATGAGACCGTTAGCTTTGGACGAGCCCTCGGGGCGGTATCTATCGTTTACTGAACGAGAGGAAATCGCGATCCTGTGGGA
GAAACAGACGGGTGTGCGTGAGATCGCTCGACGGATTGGCCGCAATCCGGCGACGATTTCTCGTGAGCTACGGCGTAATA
CTGCCACCCGTGGTGGCAAGCAGATTTATCGGGCAGGGGTGGCCCAGTGGAAAGCTCAGGAAGCCGCTAAGCGTCCCAAA
CAAGCAAAACTCGTGGATAATCCGCGCCTGCAAGACTATGTTCAGGAGCGTCTTGCTGGGACGGTCCGAGATGAAAACGG
GGTCGTCATGGCGGGGCCTGATACGCCTGCGTGGAAGGGCCGGAGCAAACCTCACAGGGCAGACCGACGGTGGTTGACCG
CGTGGAGCCCGGAGCAGATATCGCAGCGGTTAAGGATCGACTTCCCTGATGATGAGAGTATGAGAATCTCCCATGAAGCG
ATCTACCAGGCGCTCTATATTGAGGGGCGCGGGGCGCTGAAGCGTGAACTCGTGGCCGCACTGCGGACTGGGCGGGCCCT
GCGTAAACCCCGCGCCCGGTCCAAGAGCAAGCCTAAAGGTCATCTCACCGCCGATGTTGTCATCTCTAACCGGCCCCCGG
AAGCCTCGGATCGGGCGGTGCCCGGGCATTGGGAAGGAGACTTGATCATCGGTACCGGCAGGTCAGCGATCGGGACCGTG
GTCGAACGCTACAGCCGGTCGATCCTGCTGGTGCACCTGCCCCGGTTGGACGGCTGGGGTGAACAACCAAGGACGAAGAA
CGGACCTGCCTTGGGTGGGTACGGTGCTGAAGCGATGAACACCGCCCTACAAACCGTGATGAAAGATCTACCGTTACAAC
TGCGTCAAACGTTGACCTGGGACCGCGGAACCGAGCTCGCTGACCATGCCGCTTTCACTCTAGCCACGGGCACGAAAGTG
TTCTTCGCGGACCCACACTCGCCATGGCAACGTCCCACGAATGAGAACAGCAACGGACTCCTACGCCAGTACTTTCCCAA
GGGTACCGACCTGTCTCGATGGACAGCCCAAGACCTCGCCGCCATCGCCTACACGCTCAACAACAGACCAAGAAAAGTCC
TTGGATTTCGAACCCCAGCCGAAGTCTTCAATGAACAACTACAATCAATTCAAAACAACAGTGTTGCAACCACCGATTGA

Protein sequence :
MATKDWSKKTSDMPVGVRRQWRADRALRPAMRSPGRPVPSRAVQRQFWGLIATGITTAQAALQVGVSVPVGTRWFRHAGG
MRPLALDEPSGRYLSFTEREEIAILWEKQTGVREIARRIGRNPATISRELRRNTATRGGKQIYRAGVAQWKAQEAAKRPK
QAKLVDNPRLQDYVQERLAGTVRDENGVVMAGPDTPAWKGRSKPHRADRRWLTAWSPEQISQRLRIDFPDDESMRISHEA
IYQALYIEGRGALKRELVAALRTGRALRKPRARSKSKPKGHLTADVVISNRPPEASDRAVPGHWEGDLIIGTGRSAIGTV
VERYSRSILLVHLPRLDGWGEQPRTKNGPALGGYGAEAMNTALQTVMKDLPLQLRQTLTWDRGTELADHAAFTLATGTKV
FFADPHSPWQRPTNENSNGLLRQYFPKGTDLSRWTAQDLAAIAYTLNNRPRKVLGFRTPAEVFNEQLQSIQNNSVATTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 0.0 99
DIP0764 NP_939135.1 transposase Not tested Not named Protein 0.0 99
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 0.0 99