Gene Information

Name : frgD (CDHC01_0970)
Accession : YP_005135769.1
Strain : Corynebacterium diphtheriae HC01
Genome accession: NC_016786
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake system exported solute-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 988490 - 989533 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence : 
ATGTTCGAAATATCCCGATCTCGTGCGAAAGCAATGCGTCCTTTCCTTGCCCTCGCCACAGCCACTGTAATGATGCTGTC
CCTCGCAGCGTGTTCTTCTTCTGACAATTCCTCGACTAACGCTCAAGGTAACACTGATGTTGCCGTGGGCGGCCAGCGTT
TTAGCACCGCTGATCAAGAAACTGCCAAGCTTGGTAGTGATGCACAACCTGGTCAATTCCCACGTACCGTCGTTCATGCT
GCTGGAACAACGGAGATCACAACAAAGCCCGAGCGTGTTGTTGTCCTTGATACCGGTGAATTAGATAGCGTCTTGTCTCT
TGGGATCACCCCAGTAGGAATGACCACTACCAAGGGTGCTAATCCAGTGCCGAGCTATCTCGCCGATAAGGTAAAAGAAG
TGGAGCGAGTTGGCACTATCAACGAGCTTAATATCGAGGCAATTGCTGCTTTGAAGCCCGACCTGATTATTGGTTCGCAA
TTGCGTGCCGACAAACTGTATCCGCAGCTTTCTGACATTGCGCCTACGGTTTTTTCCATCCGACCAGGTTCTCCATGGAA
GGAAAACTTCCTCCTCGTTGGCGAGGCACTTGGTATGGAAAAAGAAGCGGAAGAAAAACTGAATGAGTATGCTGACCGCG
TTGCTGAGTTAAAGAATAACGTTCCTCAAAATACTGAGGTTTCTCTCGTTAGGTTTATGCCTAACAAGCTGAGGCTGTAT
GGAAACAAGTCGTTGATCGGTGTTGTTCTTGCCGATGCTGGGCTTGCTCGCCCAGAAAAACAAAACGTTGATGATCTTGC
TGTTGAAATTTCTCCAGAAAACATCGATCAAGCTGCAGGATCGGTCATCTTCTATACTTCCTACGGAAAGCCAGATGCTA
CAGGGGAAACCGCTGTAGTTGAGGGGCCGGCATGGAAAAACCTTGAAGCAGTGGCTGCGGGTAAGGCCCACCGCGTTAAT
GACGATGTGTGGTTCCTTGGTCTAGGGCCAACAGGCGCTATGGAGATTGTCTCGGACCTTCACGACTACTTACTGAAGAA
ATAA

Protein sequence : 
MFEISRSRAKAMRPFLALATATVMMLSLAACSSSDNSSTNAQGNTDVAVGGQRFSTADQETAKLGSDAQPGQFPRTVVHA
AGTTEITTKPERVVVLDTGELDSVLSLGITPVGMTTTKGANPVPSYLADKVKEVERVGTINELNIEAIAALKPDLIIGSQ
LRADKLYPQLSDIAPTVFSIRPGSPWKENFLLVGEALGMEKEAEEKLNEYADRVAELKNNVPQNTEVSLVRFMPNKLRLY
GNKSLIGVVLADAGLARPEKQNVDDLAVEISPENIDQAAGSVIFYTSYGKPDATGETAVVEGPAWKNLEAVAAGKAHRVN
DDVWFLGLGPTGAMEIVSDLHDYLLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 6e-114 76
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 5e-114 76
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 5e-114 76
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 5e-114 76