Gene Information

Name : frgA (CDHC01_0969)
Accession : YP_005135768.1
Strain : Corynebacterium diphtheriae HC01
Genome accession: NC_016786
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake system transmembrane component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 987435 - 988442 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTCGACAACCTCGTGTCCGGCTACCATTGCCTTTAGTTATCACTTTCCTTGTAATCATCCTCCTCTGCACGATCAT
TATGAGTTTAGGAGTCGGGGCTCGAAATATTACCTCACCTGACATACTCGCAGCTCTTAGACACTACGGCGACCCAACAA
ACAGCCACATCATCTGGGGACGCCGAATCCCCCGCACGCTCATCGCCATTGCAGCCGGTGCGTCACTGAGCCTCGCAGGT
GTGCTAATTCAAGCATTAACCCGTAATCCCCTAGCGGACACCGGCGCATTCGGCATCAACGCCGGCGCAGCTTTTACCAT
TGTCATCGGCATAGCTCTAGCTGGATCGCTAAGCCACATCAGCATATTCGCGCTCGCGCTACTAGGCGCAATCCTAGCCG
GAGCATGCGTATACGCACTCAGTATGACCTCATGCAAAGGCTCTGACCCCTTACGTCTCGTACTTGCCGGTGTAGCACTA
AGCGCAATACTCACCGGCATCGGCGACGGCTTATCACTAGTGAATCCCCAAGCATTTGATCGACTCAAAAGCTGGATGGT
CGGCAACATCGACGCCGGCTCGTATCAACCCGCGGCCGTAGCAGGGGTAGGACTACTCCTAGGGATTCTCGTCACTGCAA
CATGCATGAGACAACTCAACGCATTATCCCTAGGAGACGAGTTGGCCATCACCATGGGGGCGTCGATAGCAAAAACTCGG
CTATTCACATTCATCGCAATCGTCGTACTCGCTGCTAGCGCCACTGCCGCAGCCGGGGTAATTACGTTCCTAGGGCTTAT
GGTTCCACATATCGCACGATGGATCGTAGGCCCCAACCTCCTACGCTTAGTGGCCACCGCATCTCTCATCGGCCCCATCA
TCGTGCTATCAGCCGATATCCTCGGCCGAATCATCGTTCCAGGCGAATTCCCCGCCGGCGTGGTCGTCGCATTCATCGGC
GCACCATTCCTCATCGCTTACGCGCAGACGAAACGCAAGGAGATTTAG

Protein sequence : 
MLRQPRVRLPLPLVITFLVIILLCTIIMSLGVGARNITSPDILAALRHYGDPTNSHIIWGRRIPRTLIAIAAGASLSLAG
VLIQALTRNPLADTGAFGINAGAAFTIVIGIALAGSLSHISIFALALLGAILAGACVYALSMTSCKGSDPLRLVLAGVAL
SAILTGIGDGLSLVNPQAFDRLKSWMVGNIDAGSYQPAAVAGVGLLLGILVTATCMRQLNALSLGDELAITMGASIAKTR
LFTFIAIVVLAASATAAAGVITFLGLMVPHIARWIVGPNLLRLVATASLIGPIIVLSADILGRIIVPGEFPAGVVVAFIG
APFLIAYAQTKRKEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-61 66
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-61 66
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-61 66
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-61 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
frgA YP_005135768.1 iron-siderophore uptake system transmembrane component VFG0926 Protein 2e-30 41