Gene Information

Name : CDHC01_0088 (CDHC01_0088)
Accession : YP_005134889.1
Strain : Corynebacterium diphtheriae HC01
Genome accession: NC_016786
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 78347 - 79048 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence :
ATGAGTACAACTATTCGAGTCAATGAAGTCTCTAAAAGCTTCCACGGCCAGCATGTTTTGAACAATGTTTCCTGCGATAT
TCGCCCTGGGGAAGTCCACGCCCTGTTGGGGCGCAACGGTGCAGGAAAATCCACGTTGTTTTCCATTTTGCTTGGTTTGA
TCCCCGCCGATTCCGGTGAGGTGACTATCGACATTTCCCAAGTAGGTGCCTCTATTAATGGGCCAGCCTTCTATGGGCAT
TTGTCAGCGCGTTCCAATGTGCGGGTGCACAGCACGTTGTTGGGGCTGCCAGATTCAGAGGCTGATCGCGTGCTCGACGT
GGTGGGGCTTTCCGATGTTGGGTCGAAAAAGGCTCGGAGTTTTTCTACCGGCATGAAGGCTCGATTAGCACTAGCGCAGG
CGATCCTTGGTGACCCCGACATCCTCATCTTGGATGAGCCACAAAATGGTCTTGACCCGCAAGGTATCCGCGACCTGCGC
GCACTGCTGCGGGCATGGGCAGCCAGTGGCAAAACTGTGCTCGTGAGCTCCCACCAGCTAGGAGAAGTCACCCAGCTTGC
CGACACCGTCACCATCCTCGCCGAAGGCACCATCCGCTACAGCGGCCCCCTCAATCAACTCGCACCCCAAGGCCAGCTCG
AGCAGGAATTCTTCCGCCTCACCCAACCAGGTGTGCTAGAAACTGGTGACCACCATGAATAG

Protein sequence :
MSTTIRVNEVSKSFHGQHVLNNVSCDIRPGEVHALLGRNGAGKSTLFSILLGLIPADSGEVTIDISQVGASINGPAFYGH
LSARSNVRVHSTLLGLPDSEADRVLDVVGLSDVGSKKARSFSTGMKARLALAQAILGDPDILILDEPQNGLDPQGIRDLR
ALLRAWAASGKTVLVSSHQLGEVTQLADTVTILAEGTIRYSGPLNQLAPQGQLEQEFFRLTQPGVLETGDHHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-98 100
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-98 99
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-24 41
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-24 41
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-24 41
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-24 41
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 4e-34 41
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 4e-34 41