Gene Information

Name : srtD (CDHC01_2115)
Accession : YP_005136904.1
Strain : Corynebacterium diphtheriae HC01
Genome accession: NC_016786
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2255788 - 2256744 bp
Length : 957 bp
Strand : -
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGGTTACCACCGCGTCACCGCGCTCTACCGGACCGGATAACCCAGACGCGCAACCAAAGCGTCGTTGGGTCTTTTCCGG
ACTCGCATTGTTTGCGTGTATAACGGCGCTAGCCGGCCTCATGTTGGGGTTGTATCCATCTACTGCAGCGTGGTTTAACG
CCCGCGAACAGGCCAAACTGGTAGATCTCTATGATTCCAAAATTGAAAATGCAACCCCTCTTAGCGCGGAACAATTACTT
GAACTCGCGCACCGTTATAACGACCGCCTGACCGTAGGCGCTGCTCTCGATCCCTGGGCTAACGTCCCCCGCGGAGCGGG
CAAAGAAGACGGCGACGGTATGGCCTATAAAGACCAGTTGCGTGTTGACCGTACGGATGTCATGGCTCGTATACGTATCC
CCTCTATCAAGGTGGATCTACCGATCTATCACGGCACGAGCGATGACACTCTAAAGAAGGGCGCTGGCCACTTGGAAGGT
ACCTCGTTACCGGTGGGAGGACCACGCACCCATTCCGTTATCACTGCACACCGTGGCTTAGCTGAGGCCACCATGTTCAC
TAATCTCAACAAGGTTGGGGTAGGGGATAGATTCACCATTGAGGTGATGGGCGAAGTCCTTACGTATGAAGTGCGTGAAA
CTCGTGTGGTCAGCCCAGAGGACACCAGGTTCCTTCAAACTCAAGACGATCGTGACCTTGTCACACTCGTTACTTGTACT
CCGTTGGGCATCAATACACATCGCATTCTGGTGACAGCTGAGCGCATTACTTCCACCCCGCAATCCGATATCGATGCAGC
ACGCCAAGCTTCCCAAATCGGCTTCCCTTGGTGGGCGGTCATTTTCGCAGTGGGATTTAGCTTTATCGCCTTGTTCTTCT
GGCGTTCGGGTTACATGATTCCTCCAAAGAAGAAGGAAGAAGACATCGAAGGCGAAGCTGATGGCGATGAACTCTGA

Protein sequence :
MVTTASPRSTGPDNPDAQPKRRWVFSGLALFACITALAGLMLGLYPSTAAWFNAREQAKLVDLYDSKIENATPLSAEQLL
ELAHRYNDRLTVGAALDPWANVPRGAGKEDGDGMAYKDQLRVDRTDVMARIRIPSIKVDLPIYHGTSDDTLKKGAGHLEG
TSLPVGGPRTHSVITAHRGLAEATMFTNLNKVGVGDRFTIEVMGEVLTYEVRETRVVSPEDTRFLQTQDDRDLVTLVTCT
PLGINTHRILVTAERITSTPQSDIDAARQASQIGFPWWAVIFAVGFSFIALFFWRSGYMIPPKKKEEDIEGEADGDEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 5e-141 99
srtH YP_005126713.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-103 72
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-40 44
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-37 43
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 9e-41 42
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-41 41
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-41 41
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 7e-40 41