Gene Information

Name : srtC (CDHC01_0192)
Accession : YP_005134993.1
Strain : Corynebacterium diphtheriae HC01
Genome accession: NC_016786
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 168501 - 169439 bp
Length : 939 bp
Strand : +
Note : Sortase (surface protein transpeptidase)

DNA sequence :
GTGGATCACACACTCAGCACAGACGTGGAACCGAAGAAGAAACCCCGCCGTGCCAACAGCACCAAGACCAGTCCCGTTCT
GGCCGCGGTGCTCGTGATCCTCGGGGTGCTCGTGATGCTGTACCCGGTGACGTCCACCCTGTGGAATAACCACCTAGCCA
CGAAGGCCGCGCAGGAATACGCAAAACTCGAAAAGAATGCCCCACAAGAAGTGAAGAACACCCAGTGGGAGCGTGCCCAC
GAGTACAACGAGAACCGAACAACCGGCCCCATCCTCGACCCCTGGCTTGCCCGCTTCGACGAGAACAACCTAGACTACCA
AGAATACTTGGACCAGCTCGACGCGAACGAAGCGATGGCGCGCCTCATCTTCCCGAAGATCAAGGCAGACCTGCCGATCT
TCCACGGGACAGATAACGACACTTTGCAAAAAGGCTTGGGGCACCTCTTCGGCTCCGACCTGCCAGTCGGTGGTAAGGGC
ATACACTCGGTGATCACCGGCCACACGGGCTTGGCGAACTCGACCATGTTCGACCACCTCAACAAGGCGGAGAAGGGTGA
TGCCTTCTACGTCCAGGTTTCCGGCGAGAAACTGAAGTATGTGGCCGACCAGATCAAGGTTGTGCTCCCCACCGAAACCG
AAGACCTCCGCCCGGAGCAGGGCAAGGACTACATCACCCTGATCACCTGCACCCCTTATGGGATCAACACGCACCGCCTG
CTGGTGCGCGGCCACCAAGTCCCGCTGGACCCGGAGGATCACGAGGTTTTCGACAAGAACCACGGTGCCGGGTGGCAGTG
GTGGATGTACGCGCTCCTCGCGGCAGCAGCTGTCGTGCTGTTTCTGCTGCTGCGGTGGCTACTGAAGAACAAGCGGGATG
GCGAATCCCAAGAAACGACAGAGACGATGAATGACGAAGGGGCTGGAGCAGATGACTAG

Protein sequence :
MDHTLSTDVEPKKKPRRANSTKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEYAKLEKNAPQEVKNTQWERAH
EYNENRTTGPILDPWLARFDENNLDYQEYLDQLDANEAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
IHSVITGHTGLANSTMFDHLNKAEKGDAFYVQVSGEKLKYVADQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
LVRGHQVPLDPEDHEVFDKNHGAGWQWWMYALLAAAAVVLFLLLRWLLKNKRDGESQETTETMNDEGAGADD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-121 96
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-77 59
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-66 57
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-60 57
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-53 50
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-52 47
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-38 42