Gene Information

Name : spaB (CDHC01_1908)
Accession : YP_005136700.1
Strain : Corynebacterium diphtheriae HC01
Genome accession: NC_016786
Putative virulence/resistance : Virulence
Product : surface-anchored protein fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2022877 - 2023503 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence :

ATGAAAAATAACGCCATCAGCGCCGCAGTGCTAAGCCTCGCACTCATCATCGGAGCCACACCCGCACACGCACAAGAAAC
AAACACACTGGTCATTGACCTCGAACCACCCGCAGCATTCGCCGACGACCAACCCCAAGGCCACAACATCGACATCACCG
TAGCCAAACTCCACAACATCGACCCCCAAGACCACGAACGCATCCGCAACCTCCAACGTAACGGCGTACCCAACACCATC
AGCGAAGAACAACCCCACACCGCGCGTACCGACGCCACCGGCACCGCCACCATCACCAACCTGCCACCAGGGGCCTACGT
AATCCGCGACACCAACACCACGAAGCCGCGCTTTAGCCCCCTCGTGATCCCACTCGGTATCGACACCACCAGCCCCACCA
TGACATTGCGCCCCAAGCTTATCGACGTCACCCCCGGCGCGCCGAACGTGCCTAGTACACCTAGCGTACCTAGTCCGCCG
AGCGTGACTGCTCCAGCTCCGAAAAAGACACCACCGCGACTGGCCTTCACCGGCGCAAGCATCCTCGGACTGCTGGCCAT
CGCCACCATCAGCACCCTCATCGGAATCGCACTGATCCGCACACGACGTGCAGAAAATAAAGGATAA

Protein sequence :

MKNNAISAAVLSLALIIGATPAHAQETNTLVIDLEPPAAFADDQPQGHNIDITVAKLHNIDPQDHERIRNLQRNGVPNTI
SEEQPHTARTDATGTATITNLPPGAYVIRDTNTTKPRFSPLVIPLGIDTTSPTMTLRPKLIDVTPGAPNVPSTPSVPSPP
SVTAPAPKKTPPRLAFTGASILGLLAIATISTLIGIALIRTRRAENKG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
DIP2011	NP_940342.1	surface anchored protein	Not tested	Not named	Protein	2e-66	90

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
spaB	YP_005136700.1	surface-anchored protein fimbrial subunit	VFG2200	Protein	7e-67	90