Gene Information

Name : CDHC01_1317 (CDHC01_1317)
Accession : YP_005136114.1
Strain : Corynebacterium diphtheriae HC01
Genome accession: NC_016786
Putative virulence/resistance : Virulence
Product : putative resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1383564 - 1384037 bp
Length : 474 bp
Strand : -
Note : Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
ATGGGCAATGACTCTGGTTCGCGTGGGCAGCGGGTGGGCTATATCCGGGTTTCGACGGTGGAGCAGAATAATCAGCGCCA
GAAAGAACTACTCAATGCTTCCGGCAGAATTGACCGGTTCTTTGAAGATAAGATTTCCGGCCGCACCAAGACTGCCCGCC
CAGGGCTGGGGGAATGTATGGCGTATGTGCGCTACTGTGACGAACTCGTCGTCTCGTCGATCGACCGCCTCGCCCGATCG
CTGACGGATCTTCGCGGCATTGTTGATGAACTTATCGGCAAAGGTGTGACTGTTACTTTTCTGCATGAGAATCTCGCGTT
TGTGAAAGACACTACAGATCCGCGTGCGGATTTAATGCTGGGTATTTTAGGTTCGTTTGCGGAGTTTGAGCGGGCCATTA
TCCGCGAACGCCAAGCAGAGGGGATTACGTTGGCGAAAAAGGCCGGAAAGTACAAAGGCCGCTACCTGCTCTAA

Protein sequence :
MGNDSGSRGQRVGYIRVSTVEQNNQRQKELLNASGRIDRFFEDKISGRTKTARPGLGECMAYVRYCDELVVSSIDRLARS
LTDLRGIVDELIGKGVTVTFLHENLAFVKDTTDPRADLMLGILGSFAEFERAIIRERQAEGITLAKKAGKYKGRYLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res YP_005124341.1 DNA-invertase Not tested Not named Protein 9e-60 89
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 8e-31 53
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-30 53
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 8e-31 53
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 1e-29 52
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 4e-31 51
resX ADZ05759.1 invertase/resolvase Not tested AbaR10 Protein 1e-18 44
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 2e-19 42
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 2e-19 42
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 2e-19 42
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 2e-19 42
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 3e-19 42
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 3e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDHC01_1317 YP_005136114.1 putative resolvase VFG1030 Protein 3e-31 53