Gene Information

Name : xerD (CDHC01_1115)
Accession : YP_005135914.1
Strain : Corynebacterium diphtheriae HC01
Genome accession: NC_016786
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1156527 - 1157462 bp
Length : 936 bp
Strand : +
Note : -

DNA sequence :
ATGGGCTCAATAAGTAATATTGCTCGTCAATGGCTAACTCACTTAGTAGTGGAAAAAGGAGTTAGCGATAACACATTGTC
TAATTATCGTCGTGATCTTGAACGGTATACACGGTGGCTGCAAGTACAGGGAATCACAGATATTGAGAATATCTCCGCAC
AAGATATTGAAAGATATGTTCAAGAGTTGCGTAAGGGGGATAGTGATACTGGAAAAAAACCTCTAGCTGCCTCATCTGCT
GCGCGAGCTTTGATTGTTGCTCGTGGTCTACATCGTTTTGCATTGTTAGAAAACTTAGTGGAGAACGATGTATCTGCTGA
TGTCTCTCCACCTGCAATGGGGCGTCACCTGCCTGATACCCTCTCAGTCGAGGAAGTGAATCGTCTAATAGAAGCTATAC
CCATAGATGATGCGGCTTCGCCAGAAAATCTTAGGGATTGCGCTCTACTGGAGTTCCTCTATGCTACTGGAGCCCGCATT
TCGGAAGCAGTAGGTCTAGTGGTGGACGACGTGGCTGCAATTGTCGAAAATGAAGGCATTGTCCGAATAACTGGAAAGGG
CAACAAACAGCGTATTGTGCCTGTTGGTGATCAGTGTTTGTCAGCGCTCGAGCGATATGTCGTGAGAAGCAGACCGGCAA
TGTCAAAAGGGAAATCGCACGCACTTTTCCTTAATAAACGTGGCGGACAATTATCTAGACAAAGCGCTTGGCAAATTCTC
AAAAACTCAGCTCAACGCGCAGGAATTGAAAAAGATATTTCTCCACATACTTTGCGCCATAGTTTTGCCACTCATCTTTT
AGAAGGTGGGGCTGATGTTCGAGTAGTACAAGAATTGTTAGGGCATTCGTCGGTCACAACTACACAGATATACACCCATG
TAACTGCCGATAATCTACGATTTGTCTGGTCTCGTTCACATCCGCGTGCTCACTAA

Protein sequence :
MGSISNIARQWLTHLVVEKGVSDNTLSNYRRDLERYTRWLQVQGITDIENISAQDIERYVQELRKGDSDTGKKPLAASSA
ARALIVARGLHRFALLENLVENDVSADVSPPAMGRHLPDTLSVEEVNRLIEAIPIDDAASPENLRDCALLEFLYATGARI
SEAVGLVVDDVAAIVENEGIVRITGKGNKQRIVPVGDQCLSALERYVVRSRPAMSKGKSHALFLNKRGGQLSRQSAWQIL
KNSAQRAGIEKDISPHTLRHSFATHLLEGGADVRVVQELLGHSSVTTTQIYTHVTADNLRFVWSRSHPRAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-37 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-37 44