Gene Information

Name : frgD (CDCE8392_0967)
Accession : YP_005133508.1
Strain : Corynebacterium diphtheriae CDCE 8392
Genome accession: NC_016785
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake system exported solute-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 990832 - 991875 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence :
ATGTTCGAAATATCCCGATCTCGTGCGAAAGCAATGCGTCCTTTCCTTGCCCTCGCCACAGCCACTGTAATGATGCTGTC
CCTCGCAGCGTGTTCTTCTTCTGACAATTCCTCGACTAACGCTCAAGGTAACACTGATGTTGCCGTGGGCGGCCAGCGTT
TTAGCACCGCTGATCAAGAAACTGCCAAGCTTGGTAGCGATGCACAACCTGGTCAATTCCCACGTACCGTCGTTCATGCT
GCTGGAACAACGGAGATCACAACAAAGCCCGAGCGTGTTGTTGTCCTTGATACCGGTGAATTAGATAGCGTCTTGTCGCT
TGGGATCACCCCAGTAGGAATGACCACTACCAAGGGTGCTAGTCCAGTGCCGAGCTATCTCGCCGACAAAGTAAAAGACG
TGGAGCGAGTTGGCACTATCAACGAGCTTAATATCGAGGCAATTGCGGCTTTGAAGCCCGACCTGATTATTGGTTCGCAA
TTGCGTGCCGACAAACTGTATCCGCAGCTTTCTGACATTGCGCCTACGGTTTTTTCCATCCGACCAGGTTCTCCATGGAA
GGAAAACTTCCTCCTCGTTGGCGAGGCACTTGGTATGGAGAAAGAAGCGGAAGAAAAACTGAATGAGTATGCTGACCGCG
TTACTGAGCTAAAGAATAACGTTCCCCAAAATACTGAGGTTTCTCTCGTTAGGTTTATGCCTAACAAGCTGAGGCTGTAT
GGAAACAAGTCGTTGATCGGTGTTGTTCTTGCCGATGCTGGGCTTGCTCGCCCAGAAAAGCAAAACGTTGATGATCTTGC
TGTTGAAATTTCTCCAGAAAACATCGATCAAGCTGCAGGATCGGTCATCTTCTATACTTCCTACGGAAAACCAGATGCTA
CAGGGGAAACCGCTGTAGTTGAGGGGCCGGCATGGAAAAACCTTGAAGCAGTGGCTGCGGGTAAGGCCTACCGCGTTAAT
GACGATGTGTGGTTCCTTGGTCTAGGGCCAACAGGCGCTATGGAGATTGTCTCGGACCTTCACCACTACTTACTGAAGAA
ATAA

Protein sequence :
MFEISRSRAKAMRPFLALATATVMMLSLAACSSSDNSSTNAQGNTDVAVGGQRFSTADQETAKLGSDAQPGQFPRTVVHA
AGTTEITTKPERVVVLDTGELDSVLSLGITPVGMTTTKGASPVPSYLADKVKDVERVGTINELNIEAIAALKPDLIIGSQ
LRADKLYPQLSDIAPTVFSIRPGSPWKENFLLVGEALGMEKEAEEKLNEYADRVTELKNNVPQNTEVSLVRFMPNKLRLY
GNKSLIGVVLADAGLARPEKQNVDDLAVEISPENIDQAAGSVIFYTSYGKPDATGETAVVEGPAWKNLEAVAAGKAYRVN
DDVWFLGLGPTGAMEIVSDLHHYLLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 2e-112 75
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 1e-112 75
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-112 75
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-112 75