Gene Information

Name : CDCE8392_0237 (CDCE8392_0237)
Accession : YP_005132787.1
Strain : Corynebacterium diphtheriae CDCE 8392
Genome accession: NC_016785
Putative virulence/resistance : Unknown
Product : ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 233873 - 235426 bp
Length : 1554 bp
Strand : -
Note : -

DNA sequence :
ATGAGAACTGGGTTGTGGATTTTTTCGGTGGTGGCGATCGCCGCGGTGGCGGTGGGCATTCCTTATGCCATGTTATTGAA
AGCGGCAGGGACGGGCACTGCGGCGGTCGCACCGATCATCCTCAGTAGCACAATTGCATTGTGTGCAACTTTGTTGGCGG
TGGGTATTGGCACGGTGGGCGCGTTGGCGGCGGCGCAGTTTTCTCGTACTGCAGTATTGCTTCTCGACGTCATCTTGCTG
TTCCAGCTCACCATCCCGCATTTTGTTATCGGTGCTGGTTGGAAGACGATCATGGGACGCACAGGTATTCACGTGTGCTC
GCAGTGTAATTTTTCGGGCCTTGGGCCATTGTTGTTCACGTTCACGGTGGCGTTTACCCCGTTGGCATATTTTGTGCAGC
GTACGGTGTTGCGCTCGGTGTCGTCGCGTGAGGTTGATGCCGCTCGGGTGGCAGGCCTTCATGGGTGGGCGTTGTTTCGC
GCGGTGTATCAGCCGCGTTTGGTGTTGTTTGCCCCTGCGCTTGCAGTGTTTATTTTTAGTGCGGCGTTGTCGGATCCGGT
AACGCCGAATGTGATGGCGCCGCGGGCGTCGTTAGCGGCAACACGGGTGTGGTTCCAAGGCGATCAGGCGGGGACTGCGC
TGGCGCTTACGTTGCCGGTGGCTGGTGCGGTGGTCGTTGCGGGGCTGGTGTATGCACGGCTGTTGCGTAGTAATCCGGCG
TTGGTGGAGTTGCTTCATTTTGCTGGCAATTCTTCCGGCCAGCCACATCGTGCGGTGGGTGCGCAGGTGCGTGCCCCGCA
GGCGGTGTTGTGCTTCTTGGGTGCAGTTGCGGGATTATTTGTGCTGGTGGCGGCCTTTCGTGGTTTTGTGCATGGTTCTG
AGACGCCGATGGGCAATGCGGTGGTCAATACGGTGGGGTTGGCGTTTTTGGTTTTGTTGTGTTCGTTGTTGTTGTCGGCG
GTTGCGTTGGGGGCGCGGCGTTCGTGTGGCCTGCGGTGGGGTTGGTTGGGCCGGCGTGGTATTGATGCTGTGTTTGCGTT
GTTGGCGTTGTCGCCGGGGGCTGCGATTGGTTGTGGTTTGCAGATTGCGTCGAATCATCCTGGGGTGGATGGGCCGTGGG
CGTCGTTAAGTTTGGTGTTGTTGGCGTGTCTGCCGAGTTCGCTGGCTATGACGTATTTTTTGATGGTTTATGTCGGTCCG
TTGATGTCGCGTTCGGAGTATATGGTGTCGTTGTTGCAGGGTGTTGGCCCGCTGCGGGCGGTGGCGTCGATTGTGTTGCC
GCGTTCGACGAATGTGGTGATTTTGGGCTTTTTGATGGTGTTTTCTAATGCGTCGGTACTAGCGGTGCCGTTGTTGTGGG
TGAGTTCGCCGGATACTCCCCTTCTGATGTTGCGGCTTTTCACGCTTCTCGACGCCGCCAATTACCCGGCGGCGCTGTAC
ATCAGCATGACTGTGTCTCTTTTTATCGTGTCCCTTGCTGGGGTGATCGTTGTGAGTATTAATGGCGTGGGTTTGGCTGC
CTTCGCTAGGAAACAGGTGGCACCATGGCGTTAA

Protein sequence :
MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTAVLLLDVILL
FQLTIPHFVIGAGWKTIMGRTGIHVCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTVLRSVSSREVDAARVAGLHGWALFR
AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA
LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA
VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIASNHPGVDGPWASLSLVLLACLPSSLAMTYFLMVYVGP
LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY
ISMTVSLFIVSLAGVIVVSINGVGLAAFARKQVAPWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0206 YP_005126719.1 ABC transporter permease protein Not tested Not named Protein 7e-167 99
potC YP_005682547.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 2e-136 89
potC YP_005684638.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 2e-136 89
cpfrc_00180 YP_003782580.1 hypothetical protein Not tested PiCp 3 Protein 4e-150 87
potC YP_005680456.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 4e-150 87