Gene Information

Name : CDCE8392_2206 (CDCE8392_2206)
Accession : YP_005134737.1
Strain : Corynebacterium diphtheriae CDCE 8392
Genome accession: NC_016785
Putative virulence/resistance : Unknown
Product : putative type I restriction/modification system DNA methylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2364064 - 2365671 bp
Length : 1608 bp
Strand : -
Note : -

DNA sequence :
ATGGTACGGAAGAAGAAGGAAGTGGCGCAGGTCCCTTCCACCTCTAAGGAAATCAAGGACACATTGTGGAAGTCCGCGGA
TAAGCTTCGCGGTTCTATGGATGCGTCGCAGTACAAGGATGTTGCTCTGGGGCTGGTGTTCATAAAGTATGTATCGGATT
CCTTTGATGAGCGTCAGAGGGAAATCCGCGCGGAGCTAGAAGGCCAGGGCATTGATGAGGAATACATCCTAGAAGATCTT
GCCGACGTTGACGCTTACACCAGCGAGAATGTTTTTTGGGTGGCGTCGAATGCCCGTTGGGACTTCCTAAAGAAGTATTC
CAAGGGCATGGATCTGGAAGGAAAACACAAGTCTATCGGCAAGTTGATCGATGAGGCTATGCAGCAGCTCATGGCGGATA
ACGAATCGCTACTGGGCACGCTGCCGCAGATTTATGGCAAGGACAATATCGACCAGCGCCGTCTCGGTGAATTAGTGGAC
CTGTTTAGCTCTACGTACTTTGCCAGCACTAAGGATAAGAAGGCCCGCGACCTACTTGGGGAGGTCTATGAGTACTTTCT
GGACAAGTTCGCCAAGGCTGAGGGTAAGAGGGGTGGCGAGTTTTATACGCCGCAGCCGATCGTGCGGACGTTGGTGGAAA
TCCTTGAGCCAACTGAGGGGCGTGTGTATGACCCATGTTGTGGTTCGGGTGGCATGTTTGTGCAGGCGGAGAAGTTCTTG
GAGGCCACGAAGCGTGACCGCAGCAACATTGCGGTTTATGGTCAGGAGCTGAATGAGCGTACGTGGCGTATGGCGAAGAT
GAACTTGGCTATTCACGCCATCAGTTCGTCCGGTTTGGGGGAGCGCTGGGGCGACACGTTTGCTCGCGATATTCATGCGG
GCACCAAGATGGATTACATCATGGCTAATCCGCCGTTCAACATTAAGGATTGGATCCGCAATGAGGAGGATGCCCGTTGG
AAGTACGGTGTGCCTCCGGCGAAGAATGCGAACTTTGCGTGGATACAGCACATCATTTCGAAGCTGAAGGATCACGGCGA
AGCTGGTGTTGTGATGGCGAATGGCACCATGACGTCGCAAAGCTCTGGTGAGGGCGAGATCCGTAAGAACATGGTGGAAG
ATGATGTTGTTTCGTGTGTGATTGCGTTGCCGGCGCAGTTGTTCCGTGGCACGGGCATTCCGGTGTGCGTGTGGTTTTTT
GCTAAGGATAAGTCGGTGGGTGTTGGTGGCAGTGTTGATCGTCGTGGTGAGGTGTTGCTTATCGACGCCCGCCAGCTCGG
CCACATGATCGACCGCACGGAGCGGGCGTTTAGTGATGAGGACATCGCCAAGATTGCTAATGCGTTCCGAACCTGGCGTG
GGCGTAAGTCCGCGGAGGGGGAGTACGAGGACGAGGCGGGCTTCTGTAAGTCCGCGACGATTGAGGAGATCCGCGAAGCT
GGCTATGCGCTAACGCCAGGTCGCTATGTCGGCATGTCAGAGGTCGAAGACGACGGCGAACCAATTGACGAGAAGATTGC
ACGGCTCACTGCGGAACTTACCGCAGCTTTGGATGAATCTGCACGGTTGGATGCATTAGTGCGCGAACAGTTGGGGAGGT
TGAAGTGA

Protein sequence :
MVRKKKEVAQVPSTSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFIKYVSDSFDERQREIRAELEGQGIDEEYILEDL
ADVDAYTSENVFWVASNARWDFLKKYSKGMDLEGKHKSIGKLIDEAMQQLMADNESLLGTLPQIYGKDNIDQRRLGELVD
LFSSTYFASTKDKKARDLLGEVYEYFLDKFAKAEGKRGGEFYTPQPIVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFL
EATKRDRSNIAVYGQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWIRNEEDARW
KYGVPPAKNANFAWIQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNMVEDDVVSCVIALPAQLFRGTGIPVCVWFF
AKDKSVGVGGSVDRRGEVLLIDARQLGHMIDRTERAFSDEDIAKIANAFRTWRGRKSAEGEYEDEAGFCKSATIEEIREA
GYALTPGRYVGMSEVEDDGEPIDEKIARLTAELTAALDESARLDALVREQLGRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 2e-128 50
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 2e-128 49
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 4e-129 49
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 2e-110 44