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Name : irp2K (CDCE8392_1972) Accession : YP_005134503.1 Strain : Corynebacterium diphtheriae CDCE 8392 Genome accession: NC_016785 Putative virulence/resistance : Unknown Product : lipid A export ATP-binding/permease protein msbA Function : - COG functional category : - COG ID : - EC number : 3.6.3.- Position : 2084615 - 2086381 bp Length : 1767 bp Strand : - Note : ABC-type multidrug transport system, ATPase and permease components DNA sequence : ATGACCGAACAAAAACCACCCATTACATTTAGGCAAATATCTCAACCTGCCCACCGGCAGATCACGGTGTCGCTGCTATT GGCGGTGCTGGCGGCGTTTTTGTCGCTGGTGCCGGTAATCGTGCTGGTTGAGCTGGTGCGCACCGTAATGCTGTCCTTCC AGGGAGAGCCGATAGATGCGTCAAAGCTGTGGCTGCTAGTCGCGGCGCTCATGGTGGCCACCGTCCTACATGGACAGGCA ACCGTGAAGAGCCTCCAGGTAAGCCACCAGGCCGACGGCCTTTTGGGCGAGCACTTACGCCAGCAGCAGATTACCAAGCT GGGTAGGCTCCCGCTGTCTTGGTTTACGCGGACACCTTCGGGGACTGTGAAAACCTACATCGAAGACGACGTCACCAAGA TCCACCAGCTCATCGCCCACGCGCCGCACGATTATTCGGCCGGTGTACTCGTACCGCTATTGAGCCTGGGATACATGTTC GTGGTGGACTGGCGGATAGGCCTGCTGGGCCTGGTACCACTGCTGTTGGCAGTGGCCACCATGCCGTTTATGATGCGCGA GTTTCAAGAAAAGGCGGAGAAATTTAAGTCCAGCCAGAAGCAGCTAGACGCCGCCGTCGTAGAGTTGGTGCGCGGCATCC CGGTTATCAAGGTGTTTGTTCCGGAAGGCTACGACGAGAGCATTTTCCTTAGTCGTTCCCGGAGTTTTGGTGGGTTCTAT CGCGAGTGGTTGCACGCCACCGTACACCCCACCGCTTTGATGAAGATCTTCACCTCCACCGGGTTTGGCCTGCTGGTGGT AGCCGCGGCCAGCCCGTGGCTCATCACGTCTGCGGGCGTACCAGTGGCCGATGTGCTGGCAGCGTTTTTGCTCATCAACA ACATCGCCGCGCCTCTGCTTATGCTTTCGCGCACTAACATCATGTTTTCGGAGGCGAAGGCTGCCGCGGCGGATCTCACC GAGTTCTTCAACATCCCGGTATTGCCGCCCGCTGCTGGCGGCAGGGAGCCTGCAAACGCCGGAATTGAGTTGAAAGATTT AAGCTTCTCCTACGTGCCGGACACCCCGGTGCTTTCCGGCATTAACCAAAAACTTACCGCCGGCAGCATCACTGCGGTGG TGGGACCTTCCGGCTCGGGGAAGTCCACGTTAGCCGCGCTCATCCCCCGGCTATTAGACCCCACGGAGGGGTCGGTGCGC ATTGGTGGCGTCCCTAGTACTGATCTCCGATCTGACCAGCTCTACCGCAGGGTAGGGTTCGTCTTCCAGGACCCTTACCT TATGCGGATGAGCGTGCGGGATAACATTCGCCTCGCTCACCCGGAGGCCACCGACGCAGACGTGGTTCGCGCCGCCCGCG CCGCCCAGATTCATGAGCGCATTACCCATCTGCCGCGCGGCTACGACTCGGTGGTGGGAGAGGACGCGCAGCTTTCCGGT GGCGAGCAGCAGCGGCTGGCTATTGCCCGGTCCATCTTGCTCGACGCGCCGATCCTCGTGTTGGATGAGGCCACCGCTTT TGCGGATCCGGACTCCGAGGCCGCGATCCAGCGGGCCATTACCGAGCTGGTGGCCGGGCGCACGCTAGTAGTTATCGCAC ACCGGCTCCACACGATCACCGGCGCTGACCGGATCCTCATGCTGGAAAACGGTGAGGTCACCGAAGCAGGCACTCACGAA GAGTTAGTGGCGGCAGGCAAGGGCTACGCCACGATGTGGGCACGCTACCAAACCGCGCAGGCGGGCATCCAAGGGGAGGA AAAATAA Protein sequence : MTEQKPPITFRQISQPAHRQITVSLLLAVLAAFLSLVPVIVLVELVRTVMLSFQGEPIDASKLWLLVAALMVATVLHGQA TVKSLQVSHQADGLLGEHLRQQQITKLGRLPLSWFTRTPSGTVKTYIEDDVTKIHQLIAHAPHDYSAGVLVPLLSLGYMF VVDWRIGLLGLVPLLLAVATMPFMMREFQEKAEKFKSSQKQLDAAVVELVRGIPVIKVFVPEGYDESIFLSRSRSFGGFY REWLHATVHPTALMKIFTSTGFGLLVVAAASPWLITSAGVPVADVLAAFLLINNIAAPLLMLSRTNIMFSEAKAAAADLT EFFNIPVLPPAAGGREPANAGIELKDLSFSYVPDTPVLSGINQKLTAGSITAVVGPSGSGKSTLAALIPRLLDPTEGSVR IGGVPSTDLRSDQLYRRVGFVFQDPYLMRMSVRDNIRLAHPEATDADVVRAARAAQIHERITHLPRGYDSVVGEDAQLSG GEQQRLAIARSILLDAPILVLDEATAFADPDSEAAIQRAITELVAGRTLVVIAHRLHTITGADRILMLENGEVTEAGTHE ELVAAGKGYATMWARYQTAQAGIQGEEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 0.0 | 100 |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 0.0 | 99 |
