Gene Information

Name : srtC (CDCE8392_0192)
Accession : YP_005132742.1
Strain : Corynebacterium diphtheriae CDCE 8392
Genome accession: NC_016785
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 185805 - 186743 bp
Length : 939 bp
Strand : +
Note : Sortase (surface protein transpeptidase)

DNA sequence :
GTGGATCACACCCTCAGCACTGACGTTGAACCGGAGAAGGAACCGCGCCGTGCCAACAGCGCCAAAACCAGCCCCGTGCT
GGCCGCGGTGCTCGTGATCCTTGGGGTACTCGTGATGCTGTACCCGGTGACGTCCACCCTGTGGAATAACCACCTAGCCA
CGAAGGCCGCGCAGGAATACGCGAAACTCGAAAAGAGTGCCCCACAAGAGGTGAAGAACACCCAGTGGGAGCGTGCCCAC
GAGTACAACGAGAACCGAACAACCGGCCCCATCTTTGACCCCTGGCTCGCCCGCTTCGACGAGAACAACTTGGACTACCA
GGAATACCTGGACCAACTCGACGCGAACGACGCGATGGCGCGCCTCATCTTCCCCAAGATCAAGGCAGACCTGCCGATTT
TCCACGGGACAGATAACGACACTTTGCAAAAAGGCTTGGGGCACCTCTTCGGCTCCGACCTGCCGGTCGGCGGTAAGGGC
ATGCACTCGGTGATCACCGGCCACACAGGCCTAGCGAACTCGACCATGTTCGACCACCTCAACAAGGCGGAGAAGGGTGA
TACCTTCTATGTCCAGGTTTCCGGCGAGAAGCTGAAGTATGTGGTCGACCAGATCAAGGTTGTGCTCCCCACCGAAACCG
AGGATCTCCGCCCGGAGCAGGGCAAGGACTACATCACCCTGATCACCTGCACCCCCTACGGGATCAACACGCACCGCCTG
ATGGTGCGCGGCCACCAGGTTCCGCTGGACCCGGAGGATCACGAGGTTTTCGACAAGAATCACGGTGCCGGGTGGCAGTG
GTGGATGTACGCGCTCCTCGCGGCAGCAGCAGTCGTGCTGCTCCTGCTGCTGCGGTGGCTGCTGAAGAACAAGCGGGATG
GCGAATCCCAAGAAACGACAGAGACGATGAATGACGAAGGGGCTGGAGCAGATGACTAG

Protein sequence :
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEYAKLEKSAPQEVKNTQWERAH
EYNENRTTGPIFDPWLARFDENNLDYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
MHSVITGHTGLANSTMFDHLNKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
MVRGHQVPLDPEDHEVFDKNHGAGWQWWMYALLAAAAVVLLLLLRWLLKNKRDGESQETTETMNDEGAGADD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-124 99
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-77 63
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-66 58
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-59 56
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-52 49
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 4e-53 47
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-38 42