|
Name : irp2E (CDCE8392_1966) Accession : YP_005134497.1 Strain : Corynebacterium diphtheriae CDCE 8392 Genome accession: NC_016785 Putative virulence/resistance : Virulence Product : siderophore biosynthetic protein Function : - COG functional category : - COG ID : - EC number : 6.3.2.- Position : 2070733 - 2072364 bp Length : 1632 bp Strand : + Note : Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II DNA sequence : ATGAGAGGGCGCGATATCGACCGCAACAGTGTGTTGAAGCATTACGAAGGCACCGGCCACCTGGCCCGAAAAAGCCTGTG CCAGGAACTGTTCGAATCATCCGAGATTTATTCGGACCATGTAGCTGTCATCGCTGACGACGCACACCTGACCTACGCAC AACTCGAGCAATCACTTTGTGTGTTCACCGAGGAGCTACGAGAAAGCGGCCTCTCGCCAGGAGACCACGTGCTACTGCAA CTGCCAAACACCGCAGCGTATGTGGTGACTCTGCTTGCGCTGATGCGCGTGGGTGCTATCCCAACCCTGCTGCTTCCCGC GCATAGAGAGGCCGAAATTGCAGCGTTGTGTGAGTCTTTACACCCAGTTGCTTATATCGGTGGCCGCGACCATCTCGGTT TTGACACCGTAGCCATGGTAGAGGCTATGGGACCCGGCGAGCTCGGACTCAAAGAACTGTGGGCCGATAACGGACCCACG CACGACAAGGAGTCCTCGTACCGAGTTCTGCCAGGTCTCTTCACTGCCCCGATTTCTACCAAATGTTCTCCGCCTACTAA GTGGCCGGATCCACGCAGCGTTGCGCTGAATCTTTTGTCTGGCGGAACCACGAACATGCCAAAAATAATTCCCCGGGTAC ATGAGGCGTATGCATATAACACCCGTGCGGCGGCACAGTGCTGCGGCGTCGGGCCAGATACGGTATACTTGGCGGTTCTA TCTACCTCTCATGATTTCGCCTTAGCTCAGCCTGGGATTCTGGGCACCTTGCTTTCGGGCGGCACTGTGGTTCTGTGCAC CAGCGCAGCCTTCGATGAGGCGTTTCCGGCCATTGCGACCCACGGGGTCACGCTGACTGCACTAGTTCCTGCGGTAGCCC AGGTGTGGGTGGAGGCCGCAGAGTGGTTTCCCGCAGATTTCTCTTCCTTGGAGCGAATTATCATTGGCGCAGCGGCGCTT AACGACGGCTTAGGTGAGGCAATACAGGATCGTTTCGGTGTGCGTATCCACCAGGGTTATGGCATGGGTGAAGGCATCAC TACGTTCACGCGTATTGATGACCCTCCAGCGGTGATTCTTGGCACGCAAGGTCGTCCCATCTCCGATGCTGACGAGTTGG TAATCGATGGCCCGGGAGGCGAGCCGGGAGAGATACTAGAAAAGGGCCCTTATACTTTCTTCGGCTACGAAGGAAACCGC GATACCCCGGACTGTTTCACCGAGGATGGTTTCTTCCGCACCGGTGACCGTGGCTACCTTACCGAGGACGGCAACCTGGT GCTGTGCGGGCGCGTGGTTGAACAGATCAATCGCCTGGGCGAAAACGTCTCCCCTTCTGAGGTCGAGACACTCTTGTCTG GAACTCCAGGCATTAGTGCTGCAGCCGTCTTCCCAATGCCAGATAGAGCACTGGGAGAGCGCACCGTTGCAGCCATCGTC GCCCAACCAGGCGTTAACCGCTCCGCCATTCTGGATGATTTCCTCACCCGAGGCGTAGCCCGATACAAGGTGCCGGACCA GGTGATCACTGTCGACGAAATTCCACTGATCAACATCGGCAAGGTCGACAAGAAAAAGCTGCGTGCTCTCGCGGCAGCGC AATTTACTGACCGTGAATCCGAACAAAGCTGA Protein sequence : MRGRDIDRNSVLKHYEGTGHLARKSLCQELFESSEIYSDHVAVIADDAHLTYAQLEQSLCVFTEELRESGLSPGDHVLLQ LPNTAAYVVTLLALMRVGAIPTLLLPAHREAEIAALCESLHPVAYIGGRDHLGFDTVAMVEAMGPGELGLKELWADNGPT HDKESSYRVLPGLFTAPISTKCSPPTKWPDPRSVALNLLSGGTTNMPKIIPRVHEAYAYNTRAAAQCCGVGPDTVYLAVL STSHDFALAQPGILGTLLSGGTVVLCTSAAFDEAFPAIATHGVTLTALVPAVAQVWVEAAEWFPADFSSLERIIIGAAAL NDGLGEAIQDRFGVRIHQGYGMGEGITTFTRIDDPPAVILGTQGRPISDADELVIDGPGGEPGEILEKGPYTFFGYEGNR DTPDCFTEDGFFRTGDRGYLTEDGNLVLCGRVVEQINRLGENVSPSEVETLLSGTPGISAAAVFPMPDRALGERTVAAIV AQPGVNRSAILDDFLTRGVARYKVPDQVITVDEIPLINIGKVDKKKLRALAAAQFTDRESEQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2E | YP_005134497.1 | siderophore biosynthetic protein | Virulence | Not named | Protein | 0.0 | 100 |
| irp2E | YP_005163485.1 | siderophore biosynthetic protein | Virulence | Not named | Protein | 0.0 | 99 |
| irp5 | CAA73130.1 | Irp5 protein | Virulence | HPI | Protein | 3e-68 | 43 |
| irp5 | YP_001006819.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 4e-68 | 43 |
| ybtE | AAA93464.1 | yersiniabactin 2,3-dihydoxybenzoate-AMP ligase | Virulence | HPI | Protein | 1e-67 | 42 |
| irp5 | YP_002346898.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 1e-67 | 42 |
| ybtE | NP_669710.1 | salicyl-AMP ligase | Virulence | HPI | Protein | 1e-67 | 42 |
| ybtE | NP_993003.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 1e-67 | 42 |
| ybtE | YP_070120.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 1e-67 | 42 |
| ybtE | CAA21394.1 | - | Virulence | HPI | Protein | 1e-67 | 42 |
| ybtE | YP_853079.1 | yersiniabactin siderophore biosynthetic protein | Virulence | PAI IV APEC-O1 | Protein | 2e-67 | 42 |
