Gene Information

Name : spaA (CDCE8392_1895)
Accession : YP_005134429.1
Strain : Corynebacterium diphtheriae CDCE 8392
Genome accession: NC_016785
Putative virulence/resistance : Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2001399 - 2002976 bp
Length : 1578 bp
Strand : -
Note : -

DNA sequence :
ATGACTGTACGGGGATGTCGTCTGGCGACGCTTGCAACGGCTTTGACATTGTTTGTATCAAACGTCACATTTACCTCAGT
GTTTGCTGAAGAGTCACGGTACCATGCAGCCCAACTAGGAGAGAGTCCTCTCAGCGTTGACCGCCTTAGTATCCCAGAAC
GTACGAGTATTGCCGTGCATGCATTGATGGGACTGCCAACGGGACAGCCGGCTAATGGTACGAAGATCGATTCCCACAAC
TTTCCAGAAGTAGATGGTATTCCTTTTACTCTCTATCGAGTCAACAATATCGATCTAACTAAACAAGAAGGCTGGGACGC
AGCCTCGAAGATCAAGCTGGAAGAGCTTTACGTAAACGGCACACCAACCGGCAAAGTAACCAAAGTCACCACCAAGAAAA
CCGAAGGCGGCGTGGCAAAATTCGATAATCTCACACCAGCCCTCTACCTCGTCGTTCAAGAGCTCAACGGCACAGAGGCC
GTGGTGCGTTCGCAACCGTTCTTGGTGGCAGCGCCACAGACCAACCCTACTGGCAACGGCTGGCTCCGAGAAGTACACGT
ATACCCCAAGCACCAGGCTTTGTCTGCGCCTGTAAAAACTGCTGTGGATCCGGATACCACGCAGCCGGGTTTCTCTGTAG
GGGAAAACGTGCGGTATCGCGTGGCTACCAAGATTCCAGAAATCGCTGCGAACACTAAGTTTGAGGGCTTCACCGTGGCG
GATAAGTTGCCTGCTGAACTGGGCGAACCAGACACTAATAAAATAAAGGTCACCCTTGGGGGAGAGCCGATTAATTCCAC
CGACGTCTCTGTTCAAACCTATCAAGTCGGTGACCGCACCGTACTCAGTGTGCAATTATCTGGCGCAGCTCTGAGCACCT
TAGATCAGCATAAAAATGAAGAGCTCGTCGTTGAGTTCGAGGCACCTGTGACCAAGCAGCCAGAAAACGGCCAGCTAGAT
AACCAAGCATGGGTGCTGCCAAGTAACCCCACTGCTCATTGGGATCCAGAAGACGGTGGCGATGCTGCGTTGCGCGGTAT
TGCGTCGTCACGCGTGAGTTCCAAGTACGGTCAGATCACCATTAATAAGGCCTTTGACGGCAGCACCCCAAGTGCCGATC
GCACCGCGACGTTCCAGCTACATCGTTGCAAGGAAGACGGCAACCTAGTCGAATCCGACGCCCCAATTTCTCTTAATGGC
AAGCAAGAGTTTGTTACCGATCAAGACGGTAAGGCCGTACTCAGCGGTATCCACTTGGGCACCTTGCAGCTGGAGTCCAA
TGTTATGAAATACACCGACGCGTGGGCCGGCAAGGGAACGCAATTCTGCCTAGTAGAAACAGCTACTGCCAGAGGATATG
AGCTGTTGCCTAAGCCAGTGATAGTAAAACTGGAAGCCAACCAGTCGACCAACGTCCTAGTAAAGCAAGAAGTCAAGATA
AACAACAAGAAAAAGAACGCCGGATTTGAACTGCCACTCACAGGTGGTTCGGGACCCATCGCCATCACTATCGGCATCGT
TGGTTTGCTCGTCGCCCTTGCAAGCTATGTCGTATCGCGTAGGAAGGACAACCGCTAG

Protein sequence :
MTVRGCRLATLATALTLFVSNVTFTSVFAEESRYHAAQLGESPLSVDRLSIPERTSIAVHALMGLPTGQPANGTKIDSHN
FPEVDGIPFTLYRVNNIDLTKQEGWDAASKIKLEELYVNGTPTGKVTKVTTKKTEGGVAKFDNLTPALYLVVQELNGTEA
VVRSQPFLVAAPQTNPTGNGWLREVHVYPKHQALSAPVKTAVDPDTTQPGFSVGENVRYRVATKIPEIAANTKFEGFTVA
DKLPAELGEPDTNKIKVTLGGEPINSTDVSVQTYQVGDRTVLSVQLSGAALSTLDQHKNEELVVEFEAPVTKQPENGQLD
NQAWVLPSNPTAHWDPEDGGDAALRGIASSRVSSKYGQITINKAFDGSTPSADRTATFQLHRCKEDGNLVESDAPISLNG
KQEFVTDQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTQFCLVETATARGYELLPKPVIVKLEANQSTNVLVKQEVKI
NNKKKNAGFELPLTGGSGPIAITIGIVGLLVALASYVVSRRKDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2013 NP_940344.1 surface-anchored fimbrial subunit Not tested Not named Protein 0.0 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaA YP_005134429.1 putative surface-anchored fimbrial subunit VFG2201 Protein 0.0 88