Gene Information

Name : spaB (CDCE8392_1893)
Accession : YP_005134427.1
Strain : Corynebacterium diphtheriae CDCE 8392
Genome accession: NC_016785
Putative virulence/resistance : Virulence
Product : surface-anchored protein fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1999922 - 2000539 bp
Length : 618 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAATAACGCTCTCAACGCCGCAGTGCTCAGCCTCGCACTGCTCACCGGAACCACACCCGCACACGCACAAGAAGC
AAACACATTGGTCATTGACCTCGAACCACCCGCAGCATTCGCCGACGACCAACCCCAAGGTCACAACATCGACGTCACCG
TAGCAAAACTTCACAACATCGACCCCGAAGACCACGAACGCATCCGTAACCTCCAACGCAACGGTGTACCCAACACCATC
AGCGAAGAACAACCCCACACCGCGCGTACCGACGCCACCGGCACCGCCACCATCACCAACCTGCCACCAGGGGCCTACGT
AATCCGCGACACCAACACCACTAAGCCGCGCTTTAGCCCCCTCGTGATCCCACTCGGTATCGACACAACCAGCCCCACCA
TGACCCTGCGCCCCAAGCTTATCGACGCCACCCCCGGTGCACCGAACGTGCCTAGCGTACCTAGCCCGCCGAGCGTGACT
GCTCCGGCTCCGAAAAAGACACCACCGCGACTGGCCTTCACCGGCGCAAGCATCCTCGGACTGCTGGCCATCGCCACCAT
CAGCACCCTCATCGGAATCGCACTACTACGCACTCGACGTGCAGAAAAGAAAGGATAA

Protein sequence :
MKNNALNAAVLSLALLTGTTPAHAQEANTLVIDLEPPAAFADDQPQGHNIDVTVAKLHNIDPEDHERIRNLQRNGVPNTI
SEEQPHTARTDATGTATITNLPPGAYVIRDTNTTKPRFSPLVIPLGIDTTSPTMTLRPKLIDATPGAPNVPSVPSPPSVT
APAPKKTPPRLAFTGASILGLLAIATISTLIGIALLRTRRAEKKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2011 NP_940342.1 surface anchored protein Not tested Not named Protein 6e-69 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaB YP_005134427.1 surface-anchored protein fimbrial subunit VFG2200 Protein 2e-69 98