Name : spaC (CDCE8392_1892) Accession : YP_005134426.1 Strain : Corynebacterium diphtheriae CDCE 8392 Genome accession: NC_016785 Putative virulence/resistance : Virulence Product : surface-anchored protein fimbrial subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1994318 - 1999918 bp Length : 5601 bp Strand : - Note : Predicted outer membrane protein DNA sequence : GTGAGTAACCTACGTACCATCAAGAAACGAGCGTCTATCCCCGCAGCACTCGTCGCCATCCTCGCAATGGTCATGAGCGT AGTACTCGTGCCGTTAATTGCAGCGCCATCAGCGAATGCGGAGCCACTACCCAAAAAAGAGTTTGAAACCTGTGGCGGTT CTGTTGCACTTTCCTTTGACTTGTCCAATTCCCTGAGTGCTTCGGACGTGGCAAAATCTAAGCAAGCAGCGTTGGAGCTG GTCAAGAGCTTGAAAGGATCTCCCTATCGCTTTGGTATTTACACGTTTGCTTCACACTCGCCTGCTGCTGGAAACAAAAA TTTCACGCCAGTAAGTCTTGCTAATGAAGACGGATACAACAAAGTTGTTGCTGCTATCAATGACATCCAGATGCCAGCGA TCCGAGAGAACCTACAGGGTTCTCCCAACGGTGGTACCAACTGGGAGGGCGGGCTCCAAGCAATCGCGAATGACATAGAC AGCGGCATCAAGTATGACGCCGTTTACTTCATCACTGATGGTCAACCAACTTGGGATAACAATGGGCGAAATTGGTTGGG AAACACCACCGAGGTTGTGGAATTAGAAAATGCTGTTACCCAAGCCAAACGTATTTCTGATAAAGGTGCAAAACTTATTC CGGTGGGTATCGGCCAGCTTTCTGATGATAGGCTGTTTGATCTCTATAAACTGGATAACTATTCGTGGATTGATCGATGG AAAAAAGATTATTCCCTGACCGGCAAACAAATGCTGGAGAAGATAACCTCACCAGGTCTAGCGCCAATTATTTTGCCCGA CTATTCCACATTGCCGGAGCAAATGGGGCAACAGATTTTTACCGGATGTTTCCAAATCGCTAAAAACATTATTGATGCAG ACGGAAACGTGATAGAAAATCCAGCTGGCTGGAATTTCGATATTAAAGCGGCTCGCGAGCAAGGCATTCCTATGTCTATC GTGACAGATAAAAATGGTCAAGATACCTTTGCTATGAAGTCGATTAATAAAAAATCCTTCGAGATCACTATCACTGAACG ACCTACCGGAGATCAAGAACAAAACTTCCGGTTTAAAGACGCACGCTGCCAGCGCTACTCCTATGGGCAAGCACCTACTG ATATTCCGATCAAAACTAGCGATACTTCAATTACTTTGACTGCAGACACCAAAAGCTTGATCTCTTGCTTTTTTAACAAC CTGCCAGTTGTACCGGTTTCTGTTTCGAAAAAAGTAAACGTAAATACGCCACAACTTTTAGAAGAGCTCAACAATCAAAC CTTTGATTTCACCTATAGCTGTGAAAAAGGAGCTAATAAAAAAGAAATCAAGGGAAAAATTGAGGGCGTCCGCAATGGAG AATCCAAAGAGATCGGAAAAGTTGCTGTTGGAACTCAGTGCGAAATCAAGGAAGTGACTCCCAATGTCGACGATTCTCGG ATGAAGCTTTCCACCACTTGGAGCAGCGAAAGTACTGCTGCAGTATCTAATGAGGCTGACGGTACATATCGCTTTAAAGC TGGCATCGATGCGTTTAAAAACAAGAAAACAGTTCTAGCTACAGCAGAAAATAACTATGAGGCTAAAACAGCCACTATTA AGCTGACCAAGAGCATCATTAACCGTGACAAAATTCCAGCAGCAAAACTGCCTAAGGAGTTTCCTGTCACTTACACCTGT CGTTACTTACCACATCCTCATGCTCGTCCCGAACATGGTGGGCTCCCAGAAACCAATCCGTATTTTGTAGACTCTAAAAC CGTTGTTGTTCCGCGTGATGGAATTATAGAAATCGGACCTTTTCCAGTGGGAACGCAGTGCAGCTTTGAAGAAACTGCAC GGCTTGATTCGAATGTTCAAGCAGACGCTAAAGTTCCTGGTTTTAGTTTGAAAACCGAGTGGAAGTCCAACATCTGTTTC GGCAACACCACCGATAATAATTCTCAAGATTGTTCTACTAACTCAGTATGGATCCCTAAGCCAGGCCAATACTCGATCAA CGTAGAAAACACATACACACGTGAGCATGCGAGCGTGGAGATCGAAAAGAAGGTGGGCGGCGATGCCTCTGACCTCACGA ATTCACACGAGTTTTCTTTTAACCTTCGATGTGAAGATTCCGGAGTAGAAGTCTATTCACAAGACAATATTGTGGTGAAA AAAGACGGACGCCAAGTCATCGAAGACATTCCTGTTGATGCCAACTGTACGTTGATCGAGAAACAGCCTGAGCAAAAAGG CGTGGATTTTGTGGTCCCCGCGCCGTTCCGTTTACGTGCTTCAACTGCCGGCGAAATTGTCAAAGTGGTTGTAGATAACA CCGCAAAACGTCAGGTAGCTCCTATTTCAGTACAGAAAAAGGTAAATAAAAAAGACACATTTTCTCCTGAAATTTCTGCA GCAATCGATGCATTAACCTACAACGTGGTGGCAGAATGTACGGTTCCTGGCGAAGAAACGCCTCGAAAAGTTCTAAAAAC AGTAAGTGATAATCAAACTGTTGACTTCGGAAGCTTTCCAGTAGGAACTACTTGTAGCTTTAGCGAGCTCACCGAAGCCC CTGCCGGAACCGAAATGAATTATAAATTCGCGGATGGTCCAGAGGTGACAATTGAAGACTCCACTCCTATAAATAAGGTG CTGACGAATACGTTTGAAAACGCACATGGAGAGCTAACAGTAACCAAAAAGGTAATCCATGGTGATATGCCTCAAGCATT AGTAGACCAGATTCCATCGAGCTTTACAGTCAACGTCGCATGCTCAATCACTGGTAATCATTCCATCACTTTGCAAAAAG ATGAGCAGAAAAGCGTACCAGGGATTGTTGCAGGTGATAGCTGCACATTAAGTGAGGAGGTAACTCCTATAATTGGTGCT ATCCATCACAAGCACTGGATTAACGGCGAGCTGCATGAAGTTGCAGATTCTACAAACATCACGATTGACCCTAATGGTAG TAACGCAATTCGCTTGGAAAACCATTACGAAGCCGATGATGTGCCTTTGGAACTTACCAAACGTGTTCGGGTCATAGACC ACACCGGAAATGACGTCAACTCGGAACTAAAAAATGCCATTGTCCAACCAGACCAGTCATTCCTATTCCGATACCGTTGT GAAATCAATGGTCAAGTAGTTGCAGAAAATACCTTAAGTGCCGGAGAGATTAACGCTGGTTCCACTAAGGTGCCACGAGG ATCTACTTGCACGGTAGAAGAAGATACCTCTTCGGTGGAGCTACCCAATGCATCGTTATCTCGTGTTGAGTTCTCCGTTG ACGGGACAAACACGAATGATAAGGCATCGATAGCAATAAATTCGGATCAAAACCGACTAGATGCTACTAATACTTTCACG TTGAAGACTGGCTCATTTAACCTGAAAAAGAAGGTCGATGGTGAAGGCGTATCTACTATTCATAAGGATCGACGCTTTGA ACTTGCGTATCGGTGCACCTTAGGTGATTGGAAGAAGGAAGGCTCTATTACGCTGGGACGTTTTGATAGTGCCGAATCGC ATTTTGTTAAAGACATTCCCGTGGGTGCATCATGTGAGATTATTGAGGACTCTGTAAAAGCCCAAGAGCCAAACGCACAA GTAACAGCTCGTTGGACGCATACAGACAGCACGAATGGCTGGGGCGATACCGAAGCAGCATGCGAAAATCATGCAGCCTG CGAGGTTGATCCAAAAAATGAGTTTGCAACTACAGTGATTATTACTGGAAATGAGAAAGAGAATTTCCAAGGAACCTTTG TTGTATGGAACACCTACACTTACGATAAAACAAAGGTAGAGATCAACAAGGTGTTGACGAATGATGGTCCAGAACTTGCT GGTAAAGATAACTTTGCCTTCACTTTGAAATGTACTGATCCTCGTTTTGCAGGAAGTGATTTGGCAGATAAGAATTTCAT TCCAGACCCCACAATTACAGTTGCGTTAAATGCTAAAGGCCAAAGCCGAGCGTCGTACCAAGTTGCGGGCGAACGGCACG ATAGTGTTGAGGTTCCTGTTGGGTATGACTGCACTGTGACCGAAAATCCGATTGCACTTTACGATGCCAAAGCAACGACC CAATTCAGTGGCCCGGAAGTGGTGGAAAATACAGCCGTGCAACGCACAGCATCAAACTCCGCCTCGGCTCGTTTTGTCAC GGTGAAGCAAGAAGATAATGGCACTCAAAAAATTCAGGTAACTAATGATTACATTCGTCCGCGTGCCGATGTCATGGTGC ATAAGACAATCAAAAAACCAAAGCACTCGGTAGATCCTTGGCTGCTTAGCACTACTTATCGCATCACTTATGTGTGCAAC GATTCATACATCAAGGATCGTTCCTATTCAGGACACGTAGATGTAAAAGCAGATGCGGAACAACCAACGACAATCGTGGC GGATCCGATTACTGGCGTAAAAATTCCTGCGTCGGCAGTATGTACTTTCAGTGAAAACACCGAAGGGCATTTACCAGATG AGGTAAAAGGCGTAGTGGATGAAACGAATAAAGTTGCTGAATTCGCTGGGGAACATGAAAAGCGCTCCTATTTCACCCCA GAAATTGAAGACGTTGTCTTGTCGGAATCTGAACCAACACGAATTGAATTCACCAATTCGTACGTGATGCCTCAACGAAT TTTGAGCCTACAAAAATATGTTGAGGGCGACCCCGGCCATGCTGTGATTACTCCAGAAGAAACATTTGAATTCTCCTACA CCTGCACCATGCCGCATCTATTCCCAAATCAACCCAATCCTATGTCGCAGGAAGTAGGAAACAAGGTTGCACGTGGCGTC ATTAAGATTCGAGAAGGTGAGACATGGCGATCTCCTGAGGTCCCTATTGGTACGTCCTGCACGATCAAAGAAGAAGACGA CCCCGCCTTGCACACCAAGTTGGAAAACAATGCGCTGCGCATGGTGCCTACCTACTTGTTCCCCACGGAGCGTGCAGGCG CTGCTAGCGCTGCTAGTGCACCGGAGATTCCGCCGTTGACAGGCCGCCCGATTTATAACGGCACGGAGCCTCGCCTCCAG GTGCCAGAATCAGGCATTGAGCTTAACGACGCCCACTCGCACACCGTGGTGATCAACAACGTGTACGCCACTGACGCTGA GATCAACATTGCCAAGGTGAACGCCTATAACTCTCCGTTGCCCGGCGCGCGCTTCGCCGTCTATGGGATAGGAGAGAATG GCCAGCGTAAAGAGTCGGCTGAGGTTGCGGATGTGCCGGCGAAGTCTGTGGAGGAGGCGTTGTTTGCGGTGCGCTTGCGC CCTGGTAGTTACGAGTTGGTGGAGACTCAGGCTCCTCAGGGTATGCAGTTGTTGCCTAAGCCGTGGCGTTTTGATGTCAA GGCTGTGAATGCGGGTGCGATGGGTGATCTTGAGGTGACCTTGGATAACTATGATGCTGATTCGGGTTTGATCTCGGTGG AGCACCCGCAGGGTAAGCCGTGGTTGATCAAGGTGGCTAATGTGTCGGCGGCCACACTGCCATTGACTGGTTCGAATGGT TACTTGCGGTGGCTGTTGGCCGGTGCTGCGGGCCTGTTGGTGGCTGCAGCACTGTGGTTAGTGGCGCGTCGTAAGCGTTA G Protein sequence : MSNLRTIKKRASIPAALVAILAMVMSVVLVPLIAAPSANAEPLPKKEFETCGGSVALSFDLSNSLSASDVAKSKQAALEL VKSLKGSPYRFGIYTFASHSPAAGNKNFTPVSLANEDGYNKVVAAINDIQMPAIRENLQGSPNGGTNWEGGLQAIANDID SGIKYDAVYFITDGQPTWDNNGRNWLGNTTEVVELENAVTQAKRISDKGAKLIPVGIGQLSDDRLFDLYKLDNYSWIDRW KKDYSLTGKQMLEKITSPGLAPIILPDYSTLPEQMGQQIFTGCFQIAKNIIDADGNVIENPAGWNFDIKAAREQGIPMSI VTDKNGQDTFAMKSINKKSFEITITERPTGDQEQNFRFKDARCQRYSYGQAPTDIPIKTSDTSITLTADTKSLISCFFNN LPVVPVSVSKKVNVNTPQLLEELNNQTFDFTYSCEKGANKKEIKGKIEGVRNGESKEIGKVAVGTQCEIKEVTPNVDDSR MKLSTTWSSESTAAVSNEADGTYRFKAGIDAFKNKKTVLATAENNYEAKTATIKLTKSIINRDKIPAAKLPKEFPVTYTC RYLPHPHARPEHGGLPETNPYFVDSKTVVVPRDGIIEIGPFPVGTQCSFEETARLDSNVQADAKVPGFSLKTEWKSNICF GNTTDNNSQDCSTNSVWIPKPGQYSINVENTYTREHASVEIEKKVGGDASDLTNSHEFSFNLRCEDSGVEVYSQDNIVVK KDGRQVIEDIPVDANCTLIEKQPEQKGVDFVVPAPFRLRASTAGEIVKVVVDNTAKRQVAPISVQKKVNKKDTFSPEISA AIDALTYNVVAECTVPGEETPRKVLKTVSDNQTVDFGSFPVGTTCSFSELTEAPAGTEMNYKFADGPEVTIEDSTPINKV LTNTFENAHGELTVTKKVIHGDMPQALVDQIPSSFTVNVACSITGNHSITLQKDEQKSVPGIVAGDSCTLSEEVTPIIGA IHHKHWINGELHEVADSTNITIDPNGSNAIRLENHYEADDVPLELTKRVRVIDHTGNDVNSELKNAIVQPDQSFLFRYRC EINGQVVAENTLSAGEINAGSTKVPRGSTCTVEEDTSSVELPNASLSRVEFSVDGTNTNDKASIAINSDQNRLDATNTFT LKTGSFNLKKKVDGEGVSTIHKDRRFELAYRCTLGDWKKEGSITLGRFDSAESHFVKDIPVGASCEIIEDSVKAQEPNAQ VTARWTHTDSTNGWGDTEAACENHAACEVDPKNEFATTVIITGNEKENFQGTFVVWNTYTYDKTKVEINKVLTNDGPELA GKDNFAFTLKCTDPRFAGSDLADKNFIPDPTITVALNAKGQSRASYQVAGERHDSVEVPVGYDCTVTENPIALYDAKATT QFSGPEVVENTAVQRTASNSASARFVTVKQEDNGTQKIQVTNDYIRPRADVMVHKTIKKPKHSVDPWLLSTTYRITYVCN DSYIKDRSYSGHVDVKADAEQPTTIVADPITGVKIPASAVCTFSENTEGHLPDEVKGVVDETNKVAEFAGEHEKRSYFTP EIEDVVLSESEPTRIEFTNSYVMPQRILSLQKYVEGDPGHAVITPEETFEFSYTCTMPHLFPNQPNPMSQEVGNKVARGV IKIREGETWRSPEVPIGTSCTIKEEDDPALHTKLENNALRMVPTYLFPTERAGAASAASAPEIPPLTGRPIYNGTEPRLQ VPESGIELNDAHSHTVVINNVYATDAEINIAKVNAYNSPLPGARFAVYGIGENGQRKESAEVADVPAKSVEEALFAVRLR PGSYELVETQAPQGMQLLPKPWRFDVKAVNAGAMGDLEVTLDNYDADSGLISVEHPQGKPWLIKVANVSAATLPLTGSNG YLRWLLAGAAGLLVAAALWLVARRKR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
DIP2010 | NP_940341.1 | surface-anchored membrane protein | Not tested | Not named | Protein | 0.0 | 91 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
spaC | YP_005134426.1 | surface-anchored protein fimbrial subunit | VFG2199 | Protein | 0.0 | 91 |