Gene Information

Name : spaC (CDCE8392_1892)
Accession : YP_005134426.1
Strain : Corynebacterium diphtheriae CDCE 8392
Genome accession: NC_016785
Putative virulence/resistance : Virulence
Product : surface-anchored protein fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1994318 - 1999918 bp
Length : 5601 bp
Strand : -
Note : Predicted outer membrane protein

DNA sequence :
GTGAGTAACCTACGTACCATCAAGAAACGAGCGTCTATCCCCGCAGCACTCGTCGCCATCCTCGCAATGGTCATGAGCGT
AGTACTCGTGCCGTTAATTGCAGCGCCATCAGCGAATGCGGAGCCACTACCCAAAAAAGAGTTTGAAACCTGTGGCGGTT
CTGTTGCACTTTCCTTTGACTTGTCCAATTCCCTGAGTGCTTCGGACGTGGCAAAATCTAAGCAAGCAGCGTTGGAGCTG
GTCAAGAGCTTGAAAGGATCTCCCTATCGCTTTGGTATTTACACGTTTGCTTCACACTCGCCTGCTGCTGGAAACAAAAA
TTTCACGCCAGTAAGTCTTGCTAATGAAGACGGATACAACAAAGTTGTTGCTGCTATCAATGACATCCAGATGCCAGCGA
TCCGAGAGAACCTACAGGGTTCTCCCAACGGTGGTACCAACTGGGAGGGCGGGCTCCAAGCAATCGCGAATGACATAGAC
AGCGGCATCAAGTATGACGCCGTTTACTTCATCACTGATGGTCAACCAACTTGGGATAACAATGGGCGAAATTGGTTGGG
AAACACCACCGAGGTTGTGGAATTAGAAAATGCTGTTACCCAAGCCAAACGTATTTCTGATAAAGGTGCAAAACTTATTC
CGGTGGGTATCGGCCAGCTTTCTGATGATAGGCTGTTTGATCTCTATAAACTGGATAACTATTCGTGGATTGATCGATGG
AAAAAAGATTATTCCCTGACCGGCAAACAAATGCTGGAGAAGATAACCTCACCAGGTCTAGCGCCAATTATTTTGCCCGA
CTATTCCACATTGCCGGAGCAAATGGGGCAACAGATTTTTACCGGATGTTTCCAAATCGCTAAAAACATTATTGATGCAG
ACGGAAACGTGATAGAAAATCCAGCTGGCTGGAATTTCGATATTAAAGCGGCTCGCGAGCAAGGCATTCCTATGTCTATC
GTGACAGATAAAAATGGTCAAGATACCTTTGCTATGAAGTCGATTAATAAAAAATCCTTCGAGATCACTATCACTGAACG
ACCTACCGGAGATCAAGAACAAAACTTCCGGTTTAAAGACGCACGCTGCCAGCGCTACTCCTATGGGCAAGCACCTACTG
ATATTCCGATCAAAACTAGCGATACTTCAATTACTTTGACTGCAGACACCAAAAGCTTGATCTCTTGCTTTTTTAACAAC
CTGCCAGTTGTACCGGTTTCTGTTTCGAAAAAAGTAAACGTAAATACGCCACAACTTTTAGAAGAGCTCAACAATCAAAC
CTTTGATTTCACCTATAGCTGTGAAAAAGGAGCTAATAAAAAAGAAATCAAGGGAAAAATTGAGGGCGTCCGCAATGGAG
AATCCAAAGAGATCGGAAAAGTTGCTGTTGGAACTCAGTGCGAAATCAAGGAAGTGACTCCCAATGTCGACGATTCTCGG
ATGAAGCTTTCCACCACTTGGAGCAGCGAAAGTACTGCTGCAGTATCTAATGAGGCTGACGGTACATATCGCTTTAAAGC
TGGCATCGATGCGTTTAAAAACAAGAAAACAGTTCTAGCTACAGCAGAAAATAACTATGAGGCTAAAACAGCCACTATTA
AGCTGACCAAGAGCATCATTAACCGTGACAAAATTCCAGCAGCAAAACTGCCTAAGGAGTTTCCTGTCACTTACACCTGT
CGTTACTTACCACATCCTCATGCTCGTCCCGAACATGGTGGGCTCCCAGAAACCAATCCGTATTTTGTAGACTCTAAAAC
CGTTGTTGTTCCGCGTGATGGAATTATAGAAATCGGACCTTTTCCAGTGGGAACGCAGTGCAGCTTTGAAGAAACTGCAC
GGCTTGATTCGAATGTTCAAGCAGACGCTAAAGTTCCTGGTTTTAGTTTGAAAACCGAGTGGAAGTCCAACATCTGTTTC
GGCAACACCACCGATAATAATTCTCAAGATTGTTCTACTAACTCAGTATGGATCCCTAAGCCAGGCCAATACTCGATCAA
CGTAGAAAACACATACACACGTGAGCATGCGAGCGTGGAGATCGAAAAGAAGGTGGGCGGCGATGCCTCTGACCTCACGA
ATTCACACGAGTTTTCTTTTAACCTTCGATGTGAAGATTCCGGAGTAGAAGTCTATTCACAAGACAATATTGTGGTGAAA
AAAGACGGACGCCAAGTCATCGAAGACATTCCTGTTGATGCCAACTGTACGTTGATCGAGAAACAGCCTGAGCAAAAAGG
CGTGGATTTTGTGGTCCCCGCGCCGTTCCGTTTACGTGCTTCAACTGCCGGCGAAATTGTCAAAGTGGTTGTAGATAACA
CCGCAAAACGTCAGGTAGCTCCTATTTCAGTACAGAAAAAGGTAAATAAAAAAGACACATTTTCTCCTGAAATTTCTGCA
GCAATCGATGCATTAACCTACAACGTGGTGGCAGAATGTACGGTTCCTGGCGAAGAAACGCCTCGAAAAGTTCTAAAAAC
AGTAAGTGATAATCAAACTGTTGACTTCGGAAGCTTTCCAGTAGGAACTACTTGTAGCTTTAGCGAGCTCACCGAAGCCC
CTGCCGGAACCGAAATGAATTATAAATTCGCGGATGGTCCAGAGGTGACAATTGAAGACTCCACTCCTATAAATAAGGTG
CTGACGAATACGTTTGAAAACGCACATGGAGAGCTAACAGTAACCAAAAAGGTAATCCATGGTGATATGCCTCAAGCATT
AGTAGACCAGATTCCATCGAGCTTTACAGTCAACGTCGCATGCTCAATCACTGGTAATCATTCCATCACTTTGCAAAAAG
ATGAGCAGAAAAGCGTACCAGGGATTGTTGCAGGTGATAGCTGCACATTAAGTGAGGAGGTAACTCCTATAATTGGTGCT
ATCCATCACAAGCACTGGATTAACGGCGAGCTGCATGAAGTTGCAGATTCTACAAACATCACGATTGACCCTAATGGTAG
TAACGCAATTCGCTTGGAAAACCATTACGAAGCCGATGATGTGCCTTTGGAACTTACCAAACGTGTTCGGGTCATAGACC
ACACCGGAAATGACGTCAACTCGGAACTAAAAAATGCCATTGTCCAACCAGACCAGTCATTCCTATTCCGATACCGTTGT
GAAATCAATGGTCAAGTAGTTGCAGAAAATACCTTAAGTGCCGGAGAGATTAACGCTGGTTCCACTAAGGTGCCACGAGG
ATCTACTTGCACGGTAGAAGAAGATACCTCTTCGGTGGAGCTACCCAATGCATCGTTATCTCGTGTTGAGTTCTCCGTTG
ACGGGACAAACACGAATGATAAGGCATCGATAGCAATAAATTCGGATCAAAACCGACTAGATGCTACTAATACTTTCACG
TTGAAGACTGGCTCATTTAACCTGAAAAAGAAGGTCGATGGTGAAGGCGTATCTACTATTCATAAGGATCGACGCTTTGA
ACTTGCGTATCGGTGCACCTTAGGTGATTGGAAGAAGGAAGGCTCTATTACGCTGGGACGTTTTGATAGTGCCGAATCGC
ATTTTGTTAAAGACATTCCCGTGGGTGCATCATGTGAGATTATTGAGGACTCTGTAAAAGCCCAAGAGCCAAACGCACAA
GTAACAGCTCGTTGGACGCATACAGACAGCACGAATGGCTGGGGCGATACCGAAGCAGCATGCGAAAATCATGCAGCCTG
CGAGGTTGATCCAAAAAATGAGTTTGCAACTACAGTGATTATTACTGGAAATGAGAAAGAGAATTTCCAAGGAACCTTTG
TTGTATGGAACACCTACACTTACGATAAAACAAAGGTAGAGATCAACAAGGTGTTGACGAATGATGGTCCAGAACTTGCT
GGTAAAGATAACTTTGCCTTCACTTTGAAATGTACTGATCCTCGTTTTGCAGGAAGTGATTTGGCAGATAAGAATTTCAT
TCCAGACCCCACAATTACAGTTGCGTTAAATGCTAAAGGCCAAAGCCGAGCGTCGTACCAAGTTGCGGGCGAACGGCACG
ATAGTGTTGAGGTTCCTGTTGGGTATGACTGCACTGTGACCGAAAATCCGATTGCACTTTACGATGCCAAAGCAACGACC
CAATTCAGTGGCCCGGAAGTGGTGGAAAATACAGCCGTGCAACGCACAGCATCAAACTCCGCCTCGGCTCGTTTTGTCAC
GGTGAAGCAAGAAGATAATGGCACTCAAAAAATTCAGGTAACTAATGATTACATTCGTCCGCGTGCCGATGTCATGGTGC
ATAAGACAATCAAAAAACCAAAGCACTCGGTAGATCCTTGGCTGCTTAGCACTACTTATCGCATCACTTATGTGTGCAAC
GATTCATACATCAAGGATCGTTCCTATTCAGGACACGTAGATGTAAAAGCAGATGCGGAACAACCAACGACAATCGTGGC
GGATCCGATTACTGGCGTAAAAATTCCTGCGTCGGCAGTATGTACTTTCAGTGAAAACACCGAAGGGCATTTACCAGATG
AGGTAAAAGGCGTAGTGGATGAAACGAATAAAGTTGCTGAATTCGCTGGGGAACATGAAAAGCGCTCCTATTTCACCCCA
GAAATTGAAGACGTTGTCTTGTCGGAATCTGAACCAACACGAATTGAATTCACCAATTCGTACGTGATGCCTCAACGAAT
TTTGAGCCTACAAAAATATGTTGAGGGCGACCCCGGCCATGCTGTGATTACTCCAGAAGAAACATTTGAATTCTCCTACA
CCTGCACCATGCCGCATCTATTCCCAAATCAACCCAATCCTATGTCGCAGGAAGTAGGAAACAAGGTTGCACGTGGCGTC
ATTAAGATTCGAGAAGGTGAGACATGGCGATCTCCTGAGGTCCCTATTGGTACGTCCTGCACGATCAAAGAAGAAGACGA
CCCCGCCTTGCACACCAAGTTGGAAAACAATGCGCTGCGCATGGTGCCTACCTACTTGTTCCCCACGGAGCGTGCAGGCG
CTGCTAGCGCTGCTAGTGCACCGGAGATTCCGCCGTTGACAGGCCGCCCGATTTATAACGGCACGGAGCCTCGCCTCCAG
GTGCCAGAATCAGGCATTGAGCTTAACGACGCCCACTCGCACACCGTGGTGATCAACAACGTGTACGCCACTGACGCTGA
GATCAACATTGCCAAGGTGAACGCCTATAACTCTCCGTTGCCCGGCGCGCGCTTCGCCGTCTATGGGATAGGAGAGAATG
GCCAGCGTAAAGAGTCGGCTGAGGTTGCGGATGTGCCGGCGAAGTCTGTGGAGGAGGCGTTGTTTGCGGTGCGCTTGCGC
CCTGGTAGTTACGAGTTGGTGGAGACTCAGGCTCCTCAGGGTATGCAGTTGTTGCCTAAGCCGTGGCGTTTTGATGTCAA
GGCTGTGAATGCGGGTGCGATGGGTGATCTTGAGGTGACCTTGGATAACTATGATGCTGATTCGGGTTTGATCTCGGTGG
AGCACCCGCAGGGTAAGCCGTGGTTGATCAAGGTGGCTAATGTGTCGGCGGCCACACTGCCATTGACTGGTTCGAATGGT
TACTTGCGGTGGCTGTTGGCCGGTGCTGCGGGCCTGTTGGTGGCTGCAGCACTGTGGTTAGTGGCGCGTCGTAAGCGTTA
G

Protein sequence :
MSNLRTIKKRASIPAALVAILAMVMSVVLVPLIAAPSANAEPLPKKEFETCGGSVALSFDLSNSLSASDVAKSKQAALEL
VKSLKGSPYRFGIYTFASHSPAAGNKNFTPVSLANEDGYNKVVAAINDIQMPAIRENLQGSPNGGTNWEGGLQAIANDID
SGIKYDAVYFITDGQPTWDNNGRNWLGNTTEVVELENAVTQAKRISDKGAKLIPVGIGQLSDDRLFDLYKLDNYSWIDRW
KKDYSLTGKQMLEKITSPGLAPIILPDYSTLPEQMGQQIFTGCFQIAKNIIDADGNVIENPAGWNFDIKAAREQGIPMSI
VTDKNGQDTFAMKSINKKSFEITITERPTGDQEQNFRFKDARCQRYSYGQAPTDIPIKTSDTSITLTADTKSLISCFFNN
LPVVPVSVSKKVNVNTPQLLEELNNQTFDFTYSCEKGANKKEIKGKIEGVRNGESKEIGKVAVGTQCEIKEVTPNVDDSR
MKLSTTWSSESTAAVSNEADGTYRFKAGIDAFKNKKTVLATAENNYEAKTATIKLTKSIINRDKIPAAKLPKEFPVTYTC
RYLPHPHARPEHGGLPETNPYFVDSKTVVVPRDGIIEIGPFPVGTQCSFEETARLDSNVQADAKVPGFSLKTEWKSNICF
GNTTDNNSQDCSTNSVWIPKPGQYSINVENTYTREHASVEIEKKVGGDASDLTNSHEFSFNLRCEDSGVEVYSQDNIVVK
KDGRQVIEDIPVDANCTLIEKQPEQKGVDFVVPAPFRLRASTAGEIVKVVVDNTAKRQVAPISVQKKVNKKDTFSPEISA
AIDALTYNVVAECTVPGEETPRKVLKTVSDNQTVDFGSFPVGTTCSFSELTEAPAGTEMNYKFADGPEVTIEDSTPINKV
LTNTFENAHGELTVTKKVIHGDMPQALVDQIPSSFTVNVACSITGNHSITLQKDEQKSVPGIVAGDSCTLSEEVTPIIGA
IHHKHWINGELHEVADSTNITIDPNGSNAIRLENHYEADDVPLELTKRVRVIDHTGNDVNSELKNAIVQPDQSFLFRYRC
EINGQVVAENTLSAGEINAGSTKVPRGSTCTVEEDTSSVELPNASLSRVEFSVDGTNTNDKASIAINSDQNRLDATNTFT
LKTGSFNLKKKVDGEGVSTIHKDRRFELAYRCTLGDWKKEGSITLGRFDSAESHFVKDIPVGASCEIIEDSVKAQEPNAQ
VTARWTHTDSTNGWGDTEAACENHAACEVDPKNEFATTVIITGNEKENFQGTFVVWNTYTYDKTKVEINKVLTNDGPELA
GKDNFAFTLKCTDPRFAGSDLADKNFIPDPTITVALNAKGQSRASYQVAGERHDSVEVPVGYDCTVTENPIALYDAKATT
QFSGPEVVENTAVQRTASNSASARFVTVKQEDNGTQKIQVTNDYIRPRADVMVHKTIKKPKHSVDPWLLSTTYRITYVCN
DSYIKDRSYSGHVDVKADAEQPTTIVADPITGVKIPASAVCTFSENTEGHLPDEVKGVVDETNKVAEFAGEHEKRSYFTP
EIEDVVLSESEPTRIEFTNSYVMPQRILSLQKYVEGDPGHAVITPEETFEFSYTCTMPHLFPNQPNPMSQEVGNKVARGV
IKIREGETWRSPEVPIGTSCTIKEEDDPALHTKLENNALRMVPTYLFPTERAGAASAASAPEIPPLTGRPIYNGTEPRLQ
VPESGIELNDAHSHTVVINNVYATDAEINIAKVNAYNSPLPGARFAVYGIGENGQRKESAEVADVPAKSVEEALFAVRLR
PGSYELVETQAPQGMQLLPKPWRFDVKAVNAGAMGDLEVTLDNYDADSGLISVEHPQGKPWLIKVANVSAATLPLTGSNG
YLRWLLAGAAGLLVAAALWLVARRKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2010 NP_940341.1 surface-anchored membrane protein Not tested Not named Protein 0.0 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaC YP_005134426.1 surface-anchored protein fimbrial subunit VFG2199 Protein 0.0 91