Gene Information

Name : yrkD (BACAU_0463)
Accession : YP_005129192.1
Strain : Bacillus amyloliquefaciens CAU B946
Genome accession: NC_016784
Putative virulence/resistance : Unknown
Product : copper-sensing transcriptional repressor CsoR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 502739 - 502999 bp
Length : 261 bp
Strand : +
Note : -

DNA sequence :
ATGGAATATGATCAAAAGATTAAAAATCGCTTACGCCGGATAGAAGGACAGATAAAAGGTGTATTGACCATGATGGAACA
AGGAAAAGATTGCAGAGAGGTTGTGACCCAATTAGCTGCTTCACGTAATGCGATCGATCGAGCAATGGGTTTGATTGTGA
GCACAAACCTTGAACATTGTGTTCGTGAAAGTTTAGAAAAGGGAGAAGACACACAACACTTAGTAAAAGAAGCGGTCGAC
TTATTGGTAAAGAGCCGATAA

Protein sequence :
MEYDQKIKNRLRRIEGQIKGVLTMMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQHLVKEAVD
LLVKSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB83476.1 - Not tested SCC 12263 Protein 1e-18 54
SAV0048 NP_370572.1 hypothetical protein Not tested Type-II SCCmec Protein 9e-21 53
unnamed BAC57484.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 6e-21 53
SA0045 NP_373285.1 hypothetical protein Not tested Type-II SCCmec Protein 9e-21 53
unnamed BAA82210.2 - Not tested Type-II SCCmec Protein 6e-21 53
SERP2514 YP_190056.1 hypothetical protein Not tested Type-II SCCmec Protein 9e-21 53
SAPIG0063 YP_005732873.1 conserved protein YrkD Not tested Type-V SCCmec Protein 5e-21 53
SACOL0048 YP_184958.1 hypothetical protein Not tested Type-I SCCmec Protein 4e-21 53
unnamed BAB47614.1 hypothetical protein Not tested Type-III SCCmec Protein 6e-21 53
SAR0047 YP_039520.1 hypothetical protein Not tested Type-II SCCmec Protein 9e-21 53
unnamed BAA94324.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-18 53
unnamed BAA82170.2 - Not tested Type-II SCCmec Protein 6e-21 50
unnamed BAA86632.1 hypothetical protein Not tested Type-I SCCmec Protein 2e-21 50