Gene Information

Name : ciuD (CDB402_0494)
Accession : YP_005127007.1
Strain : Corynebacterium diphtheriae INCA 402
Genome accession: NC_016783
Putative virulence/resistance : Virulence
Product : putative iron transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 514827 - 515639 bp
Length : 813 bp
Strand : +
Note : -

DNA sequence : 
ATGGACCGTAATTGCACAGCAACAATGCCGCAACAGTCCTTGGGCTGTACGTCGATGTCTGCAGGGTACGGGGCAGAATT
GATTGTTCGAGATGTTTCGCTCGACGTTCCAGCGGGCAAGATTACCGCGTTGATCGGGCCAAACGGTAGCGGAAAGTCGA
CCCTGCTGAAGGTGCTTGGCAGGCAGCTGCGTGCAGAAAGCGGCCAGGTGACGTTGGATGGCCGAGATATTGCGGATTTT
GGTGCGCGGGAGTTCGCACGGAATCTTGCATTCCTTCCGCAACAGCCGGTGGTACCAGATGGCATGACGGTGCGTGAGCT
TATTTCTTTTGGACGCTATCCATATTCGGGCGCGTTTGCGTCGTTAAGTGCGGCAGATCATGCTGCCATTGAGCGGGCAG
CTGCGGCGACGAGTATCACTGAGTTTTTGGACGCCGATGCCATGGCATTGTCCGGTGGGCAAAAACAACGCATGTGGATC
GCGGTCACCCTGGCGCAAGAAACCGGAATTTTGCTTCTCGACGAACCCACGACCTTCCTTGATCCTGCGCATCAATTGGC
GATTCTTGATCTGGTTCATGAGCTGAATCAGCAAGGCCGCACGATTGTGATGGTGTTGCATGATATGGCGCATGCGGCAA
AGTATTCCGACCATGTGGTGGTGATGAAAAATGGGGAAGTTTTGCAGCAAGGGCCAACGCAGTCAACGTTGGATTCTGGG
CTGATTGAGCAGGCTTTTGGTATTTCTACCATGATGGTGACCGATCCAGAGACGAATCGCCAACTTCCGATTGCCTATGG
CATCAAACGATAG

Protein sequence : 
MDRNCTATMPQQSLGCTSMSAGYGAELIVRDVSLDVPAGKITALIGPNGSGKSTLLKVLGRQLRAESGQVTLDGRDIADF
GAREFARNLAFLPQQPVVPDGMTVRELISFGRYPYSGAFASLSAADHAAIERAAAATSITEFLDADAMALSGGQKQRMWI
AVTLAQETGILLLDEPTTFLDPAHQLAILDLVHELNQQGRTIVMVLHDMAHAAKYSDHVVVMKNGEVLQQGPTQSTLDSG
LIEQAFGISTMMVTDPETNRQLPIAYGIKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-114 99
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-91 70
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-91 70
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-91 70
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-91 70
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-46 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-45 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-44 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-44 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ciuD YP_005127007.1 putative iron transport system ATP-binding protein BAC0164 Protein 6e-47 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ciuD YP_005127007.1 putative iron transport system ATP-binding protein VFG1042 Protein 6e-47 44
ciuD YP_005127007.1 putative iron transport system ATP-binding protein VFG0925 Protein 8e-47 41